Jllumina - A comprehensive Java-based API for statistical Illumina Infinium HumanMethylation450 and MethylationEPIC data processing. - Diogo Almeida; Ida Skov; Jesper Lund; Afsaneh Mohammadnejad; Artur Silva; Fabio Vandin; Qihua Tan; Jan Baumbach; Richard Röttger (J. Integr. Bioinform., 2016)

Efficient detection of differentially methylated regions using DiMmeR. - Diogo Almeida; Ida Skov; Artur Silva; Fabio Vandin; Qihua Tan; Richard Röttger; Jan Baumbach (Bioinform., 2017)