The Third Georgia Tech-Emory International Conference on Bioinformatics: In Silico Biology; Bioinformatics After Human Genome (November 15-18, 2001, Atlanta, Georgia, USA). - Mark Borodovsky; Eugene V. Koonin; Chris Burge; James W. Fickett; John Logsdon; Andrej Sali; Gary D. Stormo; Igor B. Zhulin (Bioinform., 2001)

Four-helix bundle: a ubiquitous sensory module in prokaryotic signal transduction. - Luke E. Ulrich; Igor B. Zhulin (Bioinform., 2005)

Reconstructing Signal Transduction from Raw Genomic Data. - Igor B. Zhulin (BIBE, 2007)

FIST: a sensory domain for diverse signal transduction pathways in prokaryotes and ubiquitin signaling in eukaryotes. - Kirill Borziak; Igor B. Zhulin (Bioinform., 2007)

MiST: a microbial signal transduction database. - Luke E. Ulrich; Igor B. Zhulin (Nucleic Acids Res., 2007)

HSP-HMMER: a tool for protein domain identification on a large scale. - Bhanu Rekapalli; Christian Halloy; Igor B. Zhulin (SAC, 2009)

The MiST2 database: a comprehensive genomics resource on microbial signal transduction. - Luke E. Ulrich; Igor B. Zhulin (Nucleic Acids Res., 2010)

Conformational Coupling between Receptor and Kinase Binding Sites through a Conserved Salt Bridge in a Signaling Complex Scaffold Protein. - Davi R. Ortega; Guoya Mo; Kwangwoon Lee; Hongjun Zhou; Jérôme Baudry; Frederick W. Dahlquist; Igor B. Zhulin (PLoS Comput. Biol., 2013)

SeqDepot: streamlined database of biological sequences and precomputed features. - Luke E. Ulrich; Igor B. Zhulin (Bioinform., 2014)

CDvist: a webserver for identification and visualization of conserved domains in protein sequences. - Ogun Adebali; Davi R. Ortega; Igor B. Zhulin (Bioinform., 2015)

Evolutionary Genomics Suggests That CheV Is an Additional Adaptor for Accommodating Specific Chemoreceptors within the Chemotaxis Signaling Complex. - Davi R. Ortega; Igor B. Zhulin (PLoS Comput. Biol., 2016)

Cache Domains That are Homologous to, but Different from PAS Domains Comprise the Largest Superfamily of Extracellular Sensors in Prokaryotes. - Amit Upadhyay; Aaron D. Fleetwood; Ogun Adebali; Robert D. Finn; Igor B. Zhulin (PLoS Comput. Biol., 2016)

MiST 3.0: an updated microbial signal transduction database with an emphasis on chemosensory systems. - Vadim M. Gumerov; Davi R. Ortega; Ogun Adebali; Luke E. Ulrich; Igor B. Zhulin (Nucleic Acids Res., 2020)

TREND: a platform for exploring protein function in prokaryotes based on phylogenetic, domain architecture and gene neighborhood analyses. - Vadim M. Gumerov; Igor B. Zhulin (Nucleic Acids Res., 2020)