Multiple whole genome alignments and novel biomedical applications at the VISTA portal. - Michael Brudno; Alexander Poliakov; Simon Minovitsky; Igor Ratnere; Inna Dubchak (Nucleic Acids Res., 2007)

ATGC: a database of orthologous genes from closely related prokaryotic genomes and a research platform for microevolution of prokaryotes. - Pavel S. Novichkov; Igor Ratnere; Yuri I. Wolf; Eugene V. Koonin; Inna Dubchak (Nucleic Acids Res., 2009)

The Genome Portal of the Department of Energy Joint Genome Institute. - Igor V. Grigoriev; Henrik Nordberg; Igor Shabalov; Andrea Aerts; Mike Cantor; David M. Goodstein; Alan Kuo; Simon Minovitsky; Roman Nikitin; Robin A. Ohm; Robert Otillar; Alexander Poliakov; et al. (Nucleic Acids Res., 2012)