A Novel Microarray Gene Selection Method Based on Consistency. - Yingjie Hu; Shaoning Pang; Ilkka Havukkala (HIS, 2006)

Two-Class SVM Trees (2-SVMT) for Biomarker Data Analysis. - Shaoning Pang 001; Ilkka Havukkala; Nikola K. Kasabov (ISNN (2), 2006)

Image and Fractal Information Processing for Large-Scale Chemoinformatics, Genomics Analyses and Pattern Discovery. - Ilkka Havukkala; Lubica Benuskova; Shaoning Pang 001; Vishal Jain; Rene Kroon; Nikola K. Kasabov (PRIB, 2006)

Strong GC and AT Skew Correlation in Chicken Genome. - Xuegong Deng; Xuemei Deng; Ilkka Havukkala (PRIB, 2007)

Computationally efficient matching of MicroRNA shapes using mutual symmetry. - Arjan Kuijper; Ilkka Havukkala (SIP, 2007)

On the Reliable Identification of Plant Sequences Containing a Polyadenylation Site. - Ilkka Havukkala; Stijn Vanderlooy (J. Comput. Biol., 2007)

Classification consistency analysis for bootstrapping gene selection. - Shaoning Pang 001; Ilkka Havukkala; Yingjie Hu; Nikola K. Kasabov (Neural Comput. Appl., 2007)

Soft computing methods to predict gene regulatory networks: An integrative approach on time-series gene expression data. - Zeke S. H. Chan; Ilkka Havukkala; Vishal Jain; Yingjie Hu; Nikola K. Kasabov (Appl. Soft Comput., 2008)

Integrating Local and Personalised Modelling with Global Ontology Knowledge Bases for Biomedical and Bioinformatics Decision Support. - Nikola K. Kasabov; Qun Song 002; Lubica Benuskova; Paulo C. M. Gottgtroy; Vishal Jain; Anju Verma; Ilkka Havukkala; Elaine Rush; Russel Pears; Alex Tjahjana; Yingjie Hu; Stephen G. MacDonell (Computational Intelligence in Biomedicine and Bioinformatics, 2008)

Ontologies and semantic mining for bio-technology and chemistry data and patents. - Ilkka Havukkala (PaIR@CIKM, 2009)

Biodata Mining and Visualization - Novel Approaches - Ilkka Havukkala (World Scientific, 2010)

Comparing Bitmapped microRNA Structure Images using Mutual Symmetry. - Arjan Kuijper; Ilkka Havukkala (Int. J. Image Graph., 2013)