Inference of Cancer Progression Models with Biological Noise. - Ilya Korsunsky; Daniele Ramazzotti; Giulio Caravagna; Bud Mishra (CoRR, 2014)

CAPRI: efficient inference of cancer progression models from cross-sectional data. - Daniele Ramazzotti; Giulio Caravagna; Loes Olde Loohuis; Alex Graudenzi; Ilya Korsunsky; Giancarlo Mauri; Marco Antoniotti; Bud Mishra (Bioinform., 2015)

BioNetGen 2.2: advances in rule-based modeling. - Leonard A. Harris; Justin S. Hogg; José Juan Tapia; John A. P. Sekar; Sanjana Gupta; Ilya Korsunsky; Arshi Arora; Dipak Barua; Robert P. Sheehan; James R. Faeder (Bioinform., 2016)

A framework for employing longitudinally collected multicenter electronic health records to stratify heterogeneous patient populations on disease history. - Marc P. Maurits; Ilya Korsunsky; Soumya Raychaudhuri; Shawn N. Murphy; Jordan W. Smoller; Scott T. Weiss; Thomas W. J. Huizinga; Marcel J. T. Reinders; Elizabeth W. Karlson; Erik van den Akker 001; Rachel Knevel (J. Am. Medical Informatics Assoc., 2022)