Sibelia: A Scalable and Comprehensive Synteny Block Generation Tool for Closely Related Microbial Genomes. - Ilya Minkin; Anand Patel; Mikhail Kolmogorov; Nikolay Vyahhi; Son K. Pham (WABI, 2013)

TwoPaCo: an efficient algorithm to build the compacted de Bruijn graph from many complete genomes. - Ilya Minkin; Son K. Pham; Paul Medvedev (Bioinform., 2017)