A parameterless automatic spot detection method for cDNA microarray images. - Iman Rezaeian; Luis Rueda 001 (BIBM, 2010)

Sub-grid and Spot Detection in DNA Microarray Images Using Optimal Multi-level Thresholding. - Iman Rezaeian; Luis Rueda 001 (PRIB, 2010)

Biological assessment of grid and spot detection in cDNA microarray images. - Iman Rezaeian; Luis Rueda 001 (BCB, 2011)

Applications of Multilevel Thresholding Algorithms to Transcriptomics Data. - Luis Rueda 001; Iman Rezaeian (CIARP, 2011)

A Fully Automatic Gridding Method for cDNA Microarray Images. - Luis Rueda 001; Iman Rezaeian (BMC Bioinform., 2011)

A new algorithm for finding enriched regions in ChIP-Seq data. - Iman Rezaeian; Luis Rueda 001 (BCB, 2012)

Finding genomic features from enriched regions in ChlP-Seq data. - Iman Rezaeian; Luis Rueda 001 (BIBM, 2012)

Identifying Informative Genes for Prediction of Breast Cancer Subtypes. - Iman Rezaeian; Yifeng Li 001; Martin Crozier; Eran Andrechek; Alioune Ngom; Luis Rueda 001; Lisa A. Porter (PRIB, 2013)

Breast cancer subtype identification using machine learning techniques. - Forough Firoozbakht; Iman Rezaeian; Lisa A. Porter; Luis Rueda 001 (ICCABS, 2014)

A new multi-level thresholding algorithm for finding peaks in ChIP-Seq data. - Iman Rezaeian; Luis Rueda 001 (ICCABS, 2014)

Novel pattern recognition approaches for transcriptomics data analysis. - Iman Rezaeian (2014)

ZSeq 2.0: A fully automatic preprocessing method for next generation sequencing data. - Abed Alkhateeb; Iman Rezaeian; Luis Rueda 001 (BIBM, 2015)

Obtaining biomarkers in cancer progression from outliers of time-series clusters. - Abed Alkhateeb; Iman Rezaeian; Siva Singireddy; Luis Rueda 001 (BIBM, 2015)

A new compact set of biomarkers for distinguishing among ten breast cancer subtypes. - Forough Firoozbakht; Iman Rezaeian; Alioune Ngom; Luis Rueda 001 (BIBM, 2015)

A novel approach for finding informative genes in ten subtypes of breast cancer. - Forough Firoozbakht; Iman Rezaeian; Alioune Ngom; Luis Rueda 001; Lisa A. Porter (CIBCB, 2015)

Identifying differentially expressed transcripts associated with prostate cancer progression using RNA-Seq and machine learning techniques. - Siva Singireddy; Abed Alkhateeb; Iman Rezaeian; Luis Rueda 001; Dora Cavallo-Medved; Lisa A. Porter (CIBCB, 2015)

A Machine Learning Model for Discovery of Protein Isoforms as Biomarkers. - Manal Alshehri; Iman Rezaeian; Abed Alkhateeb; Luis Rueda 001 (BCB, 2016)

Identification of discriminative genes for predicting breast cancer subtypes. - Roohollah Etemadi; Abedalrhman Alkhateeb; Iman Rezaeian; Luis Rueda 001 (BIBM, 2016)

Predicting Outcomes of Hormone and Chemotherapy in the Molecular Taxonomy of Breast Cancer International Consortium (METABRIC) Study by Biochemically-inspired Machine Learning. - Iman Rezaeian; Eliseos J. Mucaki; Katherina Baranova; Huy Quang Pham; Dimo Angelov; Alioune Ngom; Luis Rueda 001; Peter K. Rogan (F1000Research, 2016)

A novel model used to detect differential splice junctions as biomarkers in prostate cancer from RNA-Seq data. - Iman Rezaeian; Ahmad Tavakoli; Dora Cavallo-Medved; Lisa A. Porter; Luis Rueda 001 (J. Biomed. Informatics, 2016)

Finding Transcripts Associated with Prostate Cancer Gleason Stages Using Next Generation Sequencing and Machine Learning Techniques. - Osama Hamzeh; Abedalrhman Alkhateeb; Iman Rezaeian; Aram Karkar; Luis Rueda 001 (IWBBIO (2), 2017)

An Integrative Approach for Identifying Network Biomarkers of Breast Cancer Subtypes Using Genomic, Interactomic, and Transcriptomic Data. - Forough Firoozbakht; Iman Rezaeian; Michele D'agnillo; Lisa A. Porter; Luis Rueda 001; Alioune Ngom (J. Comput. Biol., 2017)

Subscription and Redemption Prediction in Mutual Funds Using Machine Learning Techniques. - Morteza Mashayekhi; Iman Rezaeian; Annie Z. Zhang; Jonathan Anders (IEEE BigData, 2018)

Computationally repurposing drugs for breast cancer subtypes using a network-based approach. - Forough Firoozbakht; Iman Rezaeian; Luis Rueda 001; Alioune Ngom (BMC Bioinform., 2022)