Modelling Signalling Networks with Incomplete Information about Protein Activation States: A P System Framework of the KaiABC Oscillator. - Thomas Hinze; Thorsten Lenser; Gabi Escuela; Ines Heiland; Stefan Schuster (Workshop on Membrane Computing, 2009)

Chemical Analog Computers for Clock Frequency Control Based on P Modules. - Thomas Hinze; Christian Bodenstein; Benedict Schau; Ines Heiland; Stefan Schuster (Int. Conf. on Membrane Computing, 2011)

Special issue: Integration of OMICs datasets into Metabolic Pathway Analysis. - Christoph Kaleta; Luis F. de Figueiredo; Ines Heiland; Steffen Klamt; Stefan Schuster (Biosyst., 2011)

Biochemical Frequency Control by Synchronisation of Coupled Repressilators: An In Silico Study of Modules for Circadian Clock Systems. - Thomas Hinze; Mathias Schumann; Christian Bodenstein; Ines Heiland; Stefan Schuster (Comput. Intell. Neurosci., 2011)

Capturing Biological Frequency Control of Circadian Clocks by Reaction System Modularization. - Thomas Hinze; Christian Bodenstein; Ines Heiland; Stefan Schuster (ERCIM News, 2011)

Improving the accuracy of expression data analysis in time course experiments using resampling. - Wencke Walter; Bernd Striberny; Emmanuel Gaquerel; Ian T. Baldwin; Sang-Gyu Kim; Ines Heiland (BMC Bioinform., 2014)

SBMLmod: a Python-based web application and web service for efficient data integration and model simulation. - Sascha Schäuble; Anne-Kristin Stavrum; Mathias Bockwoldt; Pål Puntervoll; Ines Heiland (BMC Bioinform., 2017)

ProTaxoVis - protein taxonomic visualisation of presence. - Yin-Chen Hsieh; Mathias Bockwoldt; Ines Heiland (BMC Bioinform., 2025)