Rapid protein structure classification using one-dimensional structure profiles on the bioSCAN parallel computer. - D. L. Hoffman; S. Laiter; Raj K. Singh; Iosif I. Vaisman; Alexander Tropsha (Comput. Appl. Biosci., 1995)

Delaunay Tessellation of Proteins: Four Body Nearest-Neighbor Propensities of Amino Acid Residues. - Raj K. Singh; Alexander Tropsha; Iosif I. Vaisman (J. Comput. Biol., 1996)

SECOST: sequence-conformation-structure database for amino acid residues in proteins. - Oleg Shats; Iosif I. Vaisman; A. Shats; Simon Sherman (Bioinform., 1999)

A New Method of Secondary Structure Assignment Based on the Delaunay Tessellation of Protein Structures. - Todd J. Taylor; Iosif I. Vaisman (CSB, 2004)

Statistical Geometry and Topology of Real and Model Protein Structures. - Todd J. Taylor; Iosif I. Vaisman (ISVD, 2006)

Protein Structural Domain Assignment with a Delaunay Tessellation Derived Lattice. - Todd J. Taylor; Iosif I. Vaisman (ISVD, 2006)

A Novel Sequence-Structure Approach for Accurate Prediction of Resistance to HIV-1 Protease Inhibitors. - Majid Masso; Iosif I. Vaisman (BIBE, 2007)

Decoy Discrimination Using Contact Potentials Based on Delaunay Tessellation of Hydrated Proteins. - Gregory M. Reck; Iosif I. Vaisman (ISVD, 2007)

Discrimination and Classification of Thermophilic and Mesophilic Proteins. - Todd J. Taylor; Iosif I. Vaisman (ISVD, 2007)

Accurate prediction of enzyme mutant activity based on a multibody statistical potential. - Majid Masso; Iosif I. Vaisman (Bioinform., 2007)

Structure Based Functional Analysis of Bacteriophage f1 Gene V Protein. - Majid Masso; Ewy A. Mathé; Nida Parvez; Kahkeshan Hijazi; Iosif I. Vaisman (BIBM, 2008)

Machine Learning Approach for Classification of Zeolite Crystals. - Shujiang Yang; Mohammed Lach-hab; Iosif I. Vaisman; Estela Blaisten-Barojas (DMIN, 2008)

Computational Mutagenesis of E. coliLacRepressor: Insight into Structure-Function Relationships and Accurate Prediction of Mutant Activity. - Majid Masso; Kahkeshan Hijazi; Nida Parvez; Iosif I. Vaisman (ISBRA, 2008)

Accurate prediction of stability changes in protein mutants by combining machine learning with structure based computational mutagenesis. - Majid Masso; Iosif I. Vaisman (Bioinform., 2008)

Accurate Prediction of Stability Changes in Bacteriophage T4 Lysozyme upon Single Amino Acid Replacements. - Majid Masso; Tariq Alsheddi; Iosif I. Vaisman (BIBM, 2009)

Machine Learning Identification of Zeolite Framework Types. - Shujiang Yang; Mohammed Lach-hab; Iosif I. Vaisman; Estela Blaisten-Barojas (IC-AI, 2009)

A Cheminformatics Approach for Zeolite Framework Determination. - Shujiang Yang; Mohammed Lach-hab; Iosif I. Vaisman; Estela Blaisten-Barojas (ICCS (2), 2009)

Accurate and efficient gp120 V3 loop structure based models for the determination of HIV-1 co-receptor usage. - Majid Masso; Iosif I. Vaisman (BMC Bioinform., 2010)

Modeling Cell Proliferation Activity of Human Interleukin-3 upon Single Residue Replacements. - Majid Masso; Iosif I. Vaisman (BIOINFORMATICS, 2011)

Structure-based prediction of protein activity changes: Assessing the impact of single residue replacements. - Majid Masso; Iosif I. Vaisman (EMBC, 2011)

A structure-based computational mutagenesis elucidates the spectrum of stability-activity relationships in proteins. - Majid Masso; Iosif I. Vaisman (EMBC, 2011)

AUTO-MUTE 2.0: A Portable Framework with Enhanced Capabilities for Predicting Protein Functional Consequences upon Mutation. - Majid Masso; Iosif I. Vaisman (Adv. Bioinformatics, 2014)

Identification and Prediction of Intrinsically Disordered Regions in Proteins Using n-grams. - Mauricio Oberti; Iosif I. Vaisman (BCB, 2017)

Classification and Prediction of Antimicrobial Peptides Using N-gram Representation and Machine Learning. - Manal Othman; Sujay Ratna; Anant Tewari; Anthony M. Kang; Katherine Du; Iosif I. Vaisman (BCB, 2017)

Network Analysis of Correlated Mutations in Influenza. - Uday Yallapragada; Iosif I. Vaisman (BCB, 2017)

Machine Learning Classification of Antimicrobial Peptides Using Reduced Alphabets. - Manal Othman; Sujay Ratna; Anant Tewari; Anthony M. Kang; Iosif I. Vaisman (BCB, 2018)

shiny-pred: a server for the prediction of protein disordered regions. - Mauricio Oberti; Iosif I. Vaisman (F1000Research, 2019)

Predictive Models to Identify Small Molecule Activators and Inhibitors of Opioid Receptors. - Srilatha Sakamuru; Jinghua Zhao 003; Menghang Xia; Huixiao Hong; Anton Simeonov; Iosif I. Vaisman; Ruili Huang (J. Chem. Inf. Model., 2021)