HCV Quasispecies Assembly Using Network Flows. - Kelly Westbrooks; Irina Astrovskaya; David S. Campo; Yuri Khudyakov; Piotr Berman; Alexander Zelikovsky (ISBRA, 2008)

Mean Square Residue Biclustering with Missing Data and Row Inversions. - Stefan Gremalschi; Gulsah Altun; Irina Astrovskaya; Alexander Zelikovsky (ISBRA, 2009)

Genotype Tagging with Limited Overfitting. - Irina Astrovskaya; Alexander Zelikovsky (BSB, 2009)

Workshop: Inferring viral population from ultra-deep sequencing data. - Irina Astrovskaya (ICCABS, 2011)

Poster: ViSpA: Viral spectrum assembling method. - Irina Astrovskaya; Bassam Tork; Serghei Mangul; Kelly Westbrooks; Ion I. Mandoiu; Peter Balfe; Alexander Zelikovsky (ICCABS, 2011)

Maximum Likelihood Estimation of Incomplete Genomic Spectrum from HTS Data. - Serghei Mangul; Irina Astrovskaya; Marius Nicolae; Bassam Tork; Ion I. Mandoiu; Alexander Zelikovsky (WABI, 2011)

Inferring viral quasispecies spectra from 454 pyrosequencing reads. - Irina Astrovskaya; Bassam Tork; Serghei Mangul; Kelly Westbrooks; Ion I. Mandoiu; Peter Balfe; Alex Zelikovsky (BMC Bioinform., 2011)

De novo likelihood-based measures for comparing metagenomic assemblies. - Christopher Michael Hill; Irina Astrovskaya; Howard Huang; Sergey Koren; Atif Memon; Todd J. Treangen; Mihai Pop (BIBM, 2013)