GenExpress: A Computer System for Description, Analysis and Recognition of Regulatory Sequences in Eukaryotic Genome. - Nikolay A. Kolchanov; Mikhail P. Ponomarenko; Alexander E. Kel; Yury V. Kondrakhin; Anatoly S. Frolov; Fedor A. Kolpakov; T. N. Goryachkovskaya; O. V. Kel; Elena A. Ananko; Elena V. Ignatieva; Olga A. Podkolodnaya; Vladimir N. Babenko; et al. (ISMB, 1998)

Integrated databases and computer systems for studying eukaryotic gene expression. - Nikolay A. Kolchanov; Mikhail P. Ponomarenko; Anatoly S. Frolov; Elena A. Ananko; Fedor A. Kolpakov; Elena V. Ignatieva; Olga A. Podkolodnaya; T. N. Goryachkovskaya; Irina L. Stepanenko; Tatyana I. Merkulova; V. V. Babenko; Y. V. Ponomarenko; et al. (Bioinform., 1999)

Transcription Regulatory Regions Database (TRRD): its status in 1999. - Nikolay A. Kolchanov; Elena A. Ananko; Olga A. Podkolodnaya; Elena V. Ignatieva; Irina L. Stepanenko; Olga V. Kel-Margoulis; Alexander E. Kel; Tatyana I. Merkulova; T. N. Goryachkovskaya; T. V. Busygina; Fedor A. Kolpakov; Nikolay L. Podkolodny; et al. (Nucleic Acids Res., 1999)

Transcription Regulatory Regions Database (TRRD): its status in 2000. - Nikolay A. Kolchanov; Olga A. Podkolodnaya; Elena A. Ananko; Elena V. Ignatieva; Irina L. Stepanenko; Olga V. Kel-Margoulis; Alexander E. Kel; Tatyana I. Merkulova; T. N. Goryachkovskaya; T. V. Busygina; Fedor A. Kolpakov; Nikolay L. Podkolodny; et al. (Nucleic Acids Res., 2000)

GeneNet database: description and modeling of gene networks. - Nikolay A. Kolchanov; Eugenia A. Nedosekina; Elena A. Ananko; Vitali A. Likhoshvai; Nikolay L. Podkolodny; Alexander V. Ratushny; Irina L. Stepanenko; Olga A. Podkolodnaya; Elena V. Ignatieva; Yuri G. Matushkin (Silico Biol., 2002)

GeneNet: a database on structure and functional organisation of gene networks. - Elena A. Ananko; Nikolay L. Podkolodny; Irina L. Stepanenko; Elena V. Ignatieva; Olga A. Podkolodnaya; Nikolay A. Kolchanov (Nucleic Acids Res., 2002)

Transcription Regulatory Regions Database (TRRD): its status in 2002. - Nikolay A. Kolchanov; Elena V. Ignatieva; Elena A. Ananko; Olga A. Podkolodnaya; Irina L. Stepanenko; Tatyana I. Merkulova; Mikhail A. Pozdnyakov; Nikolay L. Podkolodny; Andrey N. Naumochkin; Aida G. Romashchenko (Nucleic Acids Res., 2002)

Application of filter technology in Photomorphogenesis Gene Network. - Olga G. Smirnova; Irina L. Stepanenko (Silico Biol., 2003)

GeneNet in 2005. - Elena A. Ananko; Nikolay L. Podkolodny; Irina L. Stepanenko; Olga A. Podkolodnaya; D. A. Rasskazov; Denis S. Miginsky; Vitali A. Likhoshvai; Alexander V. Ratushny; N. N. Podkolodnaya; Nikolay A. Kolchanov (Nucleic Acids Res., 2005)

Application of Bioinformatics Resources for Genosensor Design. - Tamara M. Khlebodarova; Nina V. Tikunova; Alla V. Kachko; Irina L. Stepanenko; Nikolay L. Podkolodny; Nikolay A. Kolchanov (J. Bioinform. Comput. Biol., 2007)

TRRD: Technology for extraction, storage, and use of knowledge about the structural-functional organization of the transcriptional regulatory regions in the eukaryotic genes. - Nikolay A. Kolchanov; Elena V. Ignatieva; Olga A. Podkolodnaya; Elena A. Ananko; Tamara M. Khlebodarova; Irina L. Stepanenko; Tatyana I. Merkulova; Vasily M. Merkulov; Nikolay L. Podkolodny; Aida G. Romashchenko (Intell. Data Anal., 2008)