MiDReG: A method of mining developmentally regulated genes using Boolean implications. - Debashis Sahoo; Jun Seita; Deepta Bhattacharya; Matthew A. Inlay; Irving L. Weissman; Sylvia K. Plevritis; David L. Dill (Proc. Natl. Acad. Sci. USA, 2010)

Three differentiation states risk-stratify bladder cancer into distinct subtypes. - Jens-Peter Volkmer; Debashis Sahoo; Robert K. Chin; Philip Levy Ho; Chad Tang; Antonina V. Kurtova; Stephen B. Willingham; Senthil K. Pazhanisamy; Humberto Contreras-Trujillo; Theresa A. Storm; Yair Lotan; Andrew H. Beck; et al. (Proc. Natl. Acad. Sci. USA, 2012)

Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets. - Jia Zhao; Gefei Wang; Jingsi Ming; Zhixiang Lin; Yang Wang; Snigdha Agarwal; Aditi Agrawal; Ahmad Al-Moujahed; Alina Alam; Megan A. Albertelli; Paul Allegakoen; Thomas Ambrosi; et al. (Nat. Comput. Sci., 2022)