Settling the Intractability of Multiple Alignment. - Isaac Elias (J. Comput. Biol., 2006)

A 1.375-Approximation Algorithm for Sorting by Transpositions. - Isaac Elias; Tzvika Hartman (IEEE ACM Trans. Comput. Biol. Bioinform., 2006)

Computational problems in evolution: Multiple alignment, genome rearrangements, and tree reconstruction. - Isaac Elias (2006)

Inferring Models of Rearrangements, Recombinations, and Horizontal Transfers by the Minimum Evolution Criterion. - Hadas Birin; Zohar Gal-Or; Isaac Elias; Tamir Tuller (WABI, 2007)

Fast computation of distance estimators. - Isaac Elias; Jens Lagergren (BMC Bioinform., 2007)

Reconstruction of Ancestral Genomic Sequences Using Likelihood. - Isaac Elias; Tamir Tuller (J. Comput. Biol., 2007)

Inferring horizontal transfers in the presence of rearrangements by the minimum evolution criterion. - Hadas Birin; Zohar Gal-Or; Isaac Elias; Tamir Tuller (Bioinform., 2008)

Fast neighbor joining. - Isaac Elias; Jens Lagergren (Theor. Comput. Sci., 2009)

fastphylo: Fast tools for phylogenetics. - Mehmood Alam Khan; Isaac Elias; Erik Sjölund; Kristina Nylander; Roman Valls Guimera; Richard Schobesberger; Peter Schmitzberger; Jens Lagergren; Lars Arvestad (BMC Bioinform., 2013)

Non-Attentive Tacotron: Robust and Controllable Neural TTS Synthesis Including Unsupervised Duration Modeling. - Jonathan Shen; Ye Jia; Mike Chrzanowski; Yu Zhang 033; Isaac Elias; Heiga Zen; Yonghui Wu (CoRR, 2020)

Parallel Tacotron: Non-Autoregressive and Controllable TTS. - Isaac Elias; Heiga Zen; Jonathan Shen; Yu Zhang 033; Ye Jia; Ron J. Weiss; Yonghui Wu (ICASSP, 2021)

Parallel Tacotron 2: A Non-Autoregressive Neural TTS Model with Differentiable Duration Modeling. - Isaac Elias; Heiga Zen; Jonathan Shen; Yu Zhang 033; Ye Jia; R. J. Skerry-Ryan; Yonghui Wu (Interspeech, 2021)

Extending Multilingual Speech Synthesis to 100+ Languages without Transcribed Data. - Takaaki Saeki; Gary Wang; Nobuyuki Morioka; Isaac Elias; Kyle Kastner; Andrew Rosenberg; Bhuvana Ramabhadran; Heiga Zen; Françoise Beaufays; Hadar Shemtov (ICASSP, 2024)

Zero-shot Cross-lingual Voice Transfer for TTS. - Fadi Biadsy; Youzheng Chen; Isaac Elias; Kyle Kastner; Gary Wang; Andrew Rosenberg; Bhuvana Ramabhadran (CoRR, 2024)

Speech Re-Painting for Robust ASR. - Kyle Kastner; Gary Wang; Isaac Elias; Takaaki Saeki; Pedro Moreno Mengibar; Françoise Beaufays; Andrew Rosenberg; Bhuvana Ramabhadran (ICASSP, 2025)