Construction of a reference gene association network from multiple profiling data: application to data analysis. - Duygu Ucar; Isaac Neuhaus; Petra Ross-MacDonald; Charles Tilford; Srinivasan Parthasarathy 001; Nathan O. Siemers; Rui-Ru Ji (Bioinform., 2007)

Transcriptional Profiling of the Dose Response: A More Powerful Approach for Characterizing Drug Activities. - Rui-Ru Ji; Heshani de Silva; Yisheng Jin; Robert E. Bruccoleri; Jian Cao; Aiqing He; Wenjun Huang; Paul S. Kayne; Isaac Neuhaus; Karl-Heinz Ott; Becky Penhallow; Mark I. Cockett; et al. (PLoS Comput. Biol., 2009)

CRISPR-DAV: CRISPR NGS data analysis and visualization pipeline. - Xuning Wang; Charles Tilford; Isaac Neuhaus; Gabe Mintier; Qi Guo; John N. Feder; Stefan Kirov (Bioinform., 2017)

canvasDesigner: a versatile interactive high-resolution scientific multi-panel visualization toolkit. - Baohong Zhang; Shanrong Zhao; Isaac Neuhaus (Bioinform., 2018)