Interactive health insight miner: an adaptive, semantic-based approach. - Isabel Funke; Rim Helaoui; Aki Härmä (INLG, 2018)

Temporal Coherence-based Self-supervised Learning for Laparoscopic Workflow Analysis. - Isabel Funke; Alexander Jenke; Sören Torge Mees; Jürgen Weitz; Stefanie Speidel; Sebastian Bodenstedt (OR 2.0/CARE/CLIP/ISIC@MICCAI, 2018)

Generative adversarial networks for specular highlight removal in endoscopic images. - Isabel Funke; Sebastian Bodenstedt; Carina Riediger; Jürgen Weitz; Stefanie Speidel (Image-Guided Procedures, 2018)

Using 3D Convolutional Neural Networks to Learn Spatiotemporal Features for Automatic Surgical Gesture Recognition in Video. - Isabel Funke; Sebastian Bodenstedt; Florian Oehme; Felix von Bechtolsheim; Jürgen Weitz; Stefanie Speidel (MICCAI (5), 2019)

Generating Large Labeled Data Sets for Laparoscopic Image Processing Tasks Using Unpaired Image-to-Image Translation. - Micha Pfeiffer; Isabel Funke; Maria R. Robu; Sebastian Bodenstedt; Leon Strenger; Sandy Engelhardt; Tobias Roß; Matthew J. Clarkson; Kurinchi Gurusamy; Brian R. Davidson; Lena Maier-Hein; Carina Riediger; et al. (MICCAI (5), 2019)

Video-based surgical skill assessment using 3D convolutional neural networks. - Isabel Funke; Sören Torge Mees; Jürgen Weitz; Stefanie Speidel (Int. J. Comput. Assist. Radiol. Surg., 2019)

Rethinking Anticipation Tasks: Uncertainty-Aware Anticipation of Sparse Surgical Instrument Usage for Context-Aware Assistance. - Dominik Rivoir; Sebastian Bodenstedt; Isabel Funke; Felix von Bechtolsheim; Marius Distler; Jürgen Weitz; Stefanie Speidel (MICCAI (3), 2020)

Gesture Recognition in Robotic Surgery With Multimodal Attention. - Beatrice van Amsterdam; Isabel Funke; Eddie Edwards; Stefanie Speidel; Justin Collins; Ashwin Sridhar; John D. Kelly; Matthew J. Clarkson; Danail Stoyanov (IEEE Trans. Medical Imaging, 2022)

Metrics Matter in Surgical Phase Recognition. - Isabel Funke; Dominik Rivoir; Stefanie Speidel (CoRR, 2023)

On the pitfalls of Batch Normalization for end-to-end video learning: A study on surgical workflow analysis. - Dominik Rivoir; Isabel Funke; Stefanie Speidel (Medical Image Anal., 2024)

AIxSuture: vision-based assessment of open suturing skills. - Hanna Hoffmann; Isabel Funke; Philipp Peters; Danush Kumar Venkatesh; Jan Egger; Dominik Rivoir; Rainer Röhrig; Frank Hölzle; Sebastian Bodenstedt; Marie-Christin Willemer; Stefanie Speidel; Behrus Puladi (Int. J. Comput. Assist. Radiol. Surg., 2024)

Mission Balance: Generating Under-represented Class Samples using Video Diffusion Models. - Danush Kumar Venkatesh; Isabel Funke; Micha Pfeiffer; Fiona R. Kolbinger; Hanna Maria Schmeiser; Jürgen Weitz; Marius Distler; Stefanie Speidel (CoRR, 2025)

TUNeS: A Temporal U-Net With Self-Attention for Video-Based Surgical Phase Recognition. - Isabel Funke; Dominik Rivoir; Stefanie Krell; Stefanie Speidel (IEEE Trans. Biomed. Eng., 2025)