Compositional Construction of SWN models. - Isabel Rojas (Comput. J., 1995)

Meeting the spirit of history. - Ursula Kretschmer; Volker Coors; Ulrike Spierling; Dieter Grasbon; Kerstin Schneider 001; Isabel Rojas; Rainer Malaka (Virtual Reality, Archeology, and Cultural Heritage, 2001)

A graph layout algorithm for drawing metabolic pathways - Moritz Y. Becker; Isabel Rojas (Bioinform., 2001)

A database system for the analysis of biochemical pathways. - Isabel Rojas; Luca Bernardi; Esther Ratsch; Renate Kania; Ulrike Wittig; Jasmin Saric (Silico Biol., 2002)

Web-based exchange of biochemical information. - Sinan Güler; Andreas Eberhart; Isabel Rojas (Bioinform., 2003)

Notes on the use of ontologies in the biochemical domain. - Isabel Rojas; Esther Ratsch; Jasmin Saric; Ulrike Wittig (Silico Biol., 2003)

Extracting Regulatory Gene Expression Networks From Pubmed. - Jasmin Saric; Lars Juhl Jensen; Peer Bork; Rossitza Ouzounova; Isabel Rojas (ACL, 2004)

Large-scale extraction of gene regulation for model organisms in an ontological context. - Jasmin Saric; Lars Juhl Jensen; Isabel Rojas (Silico Biol., 2004)

Web-based visualisation of the transcriptional control network of Escherichia coli. - Nestor Sosa; Andreas Kremling; Esther Ratsch; Isabel Rojas (Silico Biol., 2004)

Unsupervised Learning of Semantic Relations between Concepts of a Molecular Biology Ontology. - Massimiliano Ciaramita; Aldo Gangemi; Esther Ratsch; Jasmin Saric; Isabel Rojas (IJCAI, 2005)

SABIO-RK: Integration and Curation of Reaction Kinetics Data. - Ulrike Wittig; Martin Golebiewski; Renate Kania; Olga Krebs; Saqib Mir; Andreas Weidemann; Stefanie Anstein; Jasmin Saric; Isabel Rojas (DILS, 2006)

Extraction of regulatory gene/protein networks from Medline. - Jasmin Saric; Lars Juhl Jensen; Rossitza Ouzounova; Isabel Rojas; Peer Bork (Bioinform., 2006)

Integration of SABIO-RK in workbenches for kinetic model design. - Martin Golebiewski; Saqib Mir; Renate Kania; Olga Krebs; Andreas Weidemann; Ulrike Wittig; Isabel Rojas (BMC Syst. Biol., 2007)

SABIO-RK: a database for biochemical reactions and their kinetics. - Isabel Rojas; Martin Golebiewski; Renate Kania; Olga Krebs; Saqib Mir; Andreas Weidemann; Ulrike Wittig (BMC Syst. Biol., 2007)

Storing and Annotating of Kinetic Data. - Isabel Rojas; Martin Golebiewski; Renate Kania; Olga Krebs; Saqib Mir; Andreas Weidemann; Ulrike Wittig (Silico Biol., 2007)

Workshop on "Storage and Annotation of Reaction Kinetics Data", Villa Bosch in Heidelberg, May 21-23, 2007. - Isabel Rojas; Ulrike Wittig (Silico Biol., 2007)

SABIO-RK: A data warehouse for biochemical reactions and their kinetics. - Olga Krebs; Martin Golebiewski; Renate Kania; Saqib Mir; Jasmin Saric; Andreas Weidemann; Ulrike Wittig; Isabel Rojas (J. Integr. Bioinform., 2007)

SYCAMORE - a systems biology computational analysis and modeling research environment. - Andreas Weidemann; Stefan Richter 002; Matthias Stein; Sven Sahle; Ralph Gauges; Razif R. Gabdoulline; Irina Surovtsova; Nils Semmelrock; Bruno Besson; Isabel Rojas; Rebecca C. Wade; Ursula Kummer (Bioinform., 2008)

Unsupervised Learning of Semantic Relations for Molecular Biology Ontologies. - Massimiliano Ciaramita; Aldo Gangemi; Esther Ratsch; Jasmin Saric; Isabel Rojas (Ontology Learning and Population, 2008)

Web-Prospector - An Automatic, Site-Wide Wrapper Induction Approach for Scientific Deep-Web Databases. - Saqib Mir; Steffen Staab; Isabel Rojas (BTW, 2009)

Site-Wide Wrapper Induction for Life Science Deep Web Databases. - Saqib Mir; Steffen Staab; Isabel Rojas (DILS, 2009)

Flache und semantische Verarbeitung von Namen biochemischer Verbindungen. - Henriette Engelken; Martin Golebiewski; Meik Bittkowski; Fritz Hamm; Jasmin Saric; Ulrike Wittig; Wolfgang Müller 001; Uwe Reyle; Isabel Rojas (GI Jahrestagung, 2009)

An Unsupervised Approach for Acquiring Ontologies and RDF Data from Online Life Science Databases. - Saqib Mir; Steffen Staab; Isabel Rojas (ESWC (2), 2010)

Herausforderungen bei der Extraktion von biochemischen Daten aus der Literatur. - Ulrike Wittig; Renate Kania; Isabel Rojas; Wolfgang Müller 001 (GI Jahrestagung (2), 2010)

A-R-E: The Author-Review-Execute Environment. - Wolfgang Müller 001; Isabel Rojas; Andreas Eberhart; Peter Haase 001; Michael Schmidt 002 (ICCS, 2011)

SABIO-RK - database for biochemical reaction kinetics. - Ulrike Wittig; Renate Kania; Martin Golebiewski; Maja Rey; Lei Shi; Lenneke Jong; Enkhjargal Algaa; Andreas Weidemann; Heidrun Sauer-Danzwith; Saqib Mir; Olga Krebs; Meik Bittkowski; et al. (Nucleic Acids Res., 2012)