3D boundary extraction of the left ventricle by a deformable model with a priori information. - Patrick Clarysse; Fabrice Poupon; B. Barbier; Isabelle E. Magnin (ICIP, 1995)

Temporal analysis of regional wall motion from cine cardiac MRI. - Osman M. Ratib; Dominique Didier; Anne Chretien; Antoine Rosset; Isabelle E. Magnin; Yves Ligier (Image Processing, 1996)

On the choice of the first level on graph pyramids. - Christophe E. Mathieu; Isabelle E. Magnin (J. Math. Imaging Vis., 1996)

Bscan image segmentation by thresholding using cooccurrence matrix analysis. - Gilles Corneloup; Joseph Moysan; Isabelle E. Magnin (Pattern Recognit., 1996)

Space-Variant Deconvolution for Synthetic Aperture Imaging Using Simulated Annealing. - Marc C. Robini; Thierry Rastello; Didier Vray; Isabelle E. Magnin (ICIP (1), 1997)

Modeling 3D Deformable Object with The Active Pyramid. - Pierre-Jean Reissman; Isabelle E. Magnin (Int. J. Pattern Recognit. Artif. Intell., 1997)

Estimation of three-dimensional cardiac velocity fields: assessment of a differential method and application to three-dimensional CT data. - Jean-Marie Gorce; Denis Friboulet; Isabelle E. Magnin (Medical Image Anal., 1997)

Tracking Geometrical Descriptors on 3D Deformable Surfaces. Applicaton to the Left-Ventricular Surface of the Heart. - Patrick Clarysse; Denis Friboulet; Isabelle E. Magnin (IEEE Trans. Medical Imaging, 1997)

On the Coding of Active Quadtree Mesh. - Hugues Benoit-Cattin; Anne C. Planat; Pascal Joachimsmann; Atilla Baskurt; Patrick Clarysse; Isabelle E. Magnin (ICIP (2), 1998)

Simulated Annealing based Shift-Variant Image Restoration using the Multiresolution Wavelet Transform. - Marc C. Robini; Isabelle E. Magnin (ICIP (1), 1998)

Segmentation of Magnetic Resonance Images Using 3D Deformable Models. - Jyrki Lötjönen; Isabelle E. Magnin; Pierre-Jean Reissman; Jukka Nenonen; Toivo Katila (MICCAI, 1998)

Multi-object Deformable Templates Dedicated to the Segmentation of Brain Deep Structures. - Fabrice Poupon; Jean-François Mangin; Dominique Hasboun; Cyril Poupon; Isabelle E. Magnin; Vincent Frouin (MICCAI, 1998)

3-D Reconstruction from a Few Radiographs Using the Metropolis Dynamics with Annealing. - Marc C. Robini; Isabelle E. Magnin (ICIP (3), 1999)

A Multiresolution Wavelet Scheme for Irregularly Subdivided 3D Triangular Mesh. - Sébastien Valette; Yun-Sang Kim; Ho-Youl Jung; Isabelle E. Magnin; Rémy Prost (ICIP (1), 1999)

Automatic Reconstruction of 3D Geometry Using Projections and a Geometric Prior Model. - Jyrki Lötjönen; Isabelle E. Magnin; Lutz Reinhardt; Jukka Nenonen; Toivo Katila (MICCAI, 1999)

Model extraction from magnetic resonance volume data using the deformable pyramid. - Jyrki Lötjönen; Pierre-Jean Reissman; Isabelle E. Magnin; Toivo Katila (Medical Image Anal., 1999)

Simulated annealing, acceleration techniques, and image restoration. - Marc C. Robini; Thierry Rastello; Isabelle E. Magnin (IEEE Trans. Image Process., 1999)

Reconstruction of 3D Geometry Using 2D Profiles and a Geometric Prior Model. - Jyrki Lötjönen; Isabelle E. Magnin; Jukka Nenonen; Toivo Katila (IEEE Trans. Medical Imaging, 1999)

An Elasticity-Based Region Model and its Application to the Estimation of the Heart Deformation in Tagged MRI. - Fabrice Vincent; Patrick Clarysse; Pierre Croisille; Isabelle E. Magnin (ICIP, 2000)

A Deformable Vessel Model with Single Point Initialization for Segmentation, Quantification and Visualization of Blood Vessels in 3D MRA. - Marcela Hernández Hoyos; Alfred Anwander; Maciej Orkisz; Jean-Pierre Roux; Philippe Douek; Isabelle E. Magnin (MICCAI, 2000)

Two-dimensional spatial and temporal displacement and deformation field fitting from cardiac magnetic resonance tagging. - Patrick Clarysse; C. Basset; Leila Khouas; Pierre Croisille; Denis Friboulet; Christophe Odet; Isabelle E. Magnin (Medical Image Anal., 2000)

The effect of geometric and topologic differences in boundary element models on magnetocardiographic localization accuracy. - Katja Pesola; Jyrki Lötjönen; Jukka Nenonen; Isabelle E. Magnin; Kirsi Lauerma; Riccardo Fenici; Toivo Katila (IEEE Trans. Biomed. Eng., 2000)

Dynamic Active Contour Model for Size Independent Blood Vessel Lumen Segmentation and Quantification in High-Resolution Magnetic Resonance Images. - Catherine Desbleds-Mansard; Alfred Anwander; Linda Chaabane; Maciej Orkisz; Bruno Neyran; Philippe Douek; Isabelle E. Magnin (CAIP, 2001)

Attempts to Bronchial Tumor Motion Tracking in Portal Images during Conformal Radiotherapy Treatment. - Maciej Orkisz; Anne Frery; Olivier Chapet; Françoise Mornex; Isabelle E. Magnin (CAIP, 2001)

Integrated Quantitative Analysis of Tagged Magnetic Resonance Images. - Patrick Clarysse; Pierre Croisille; Luc Bracoud; Isabelle E. Magnin (FIMH, 2001)

Introducing Spectral Estimation for Boundary Detection in Echographic Radiofrequency Images. - Igor Dydenko; Denis Friboulet; Isabelle E. Magnin (FIMH, 2001)

A 3-D Model-Based Approach for the PET-Functional and MR-Anatomical Cardiac Imaging Data Fusion. - Timo Mäkelä; Quoc Cuong Pham; Patrick Clarysse; Jyrki Lötjönen; Kirsi Lauerma; Helena Hänninen; Juhani Knuuti; Toivo Katila; Isabelle E. Magnin (FIMH, 2001)

Active mesh for video segmentation and objects tracking. - Sébastien Valette; Isabelle E. Magnin; Rémy Prost (ICIP (2), 2001)

Size Independent Active Contour Model for Blood Vessel Lumen Quantification in High-Resolution Magnetic Resonance Images. - Catherine Desbleds-Mansard; Alfred Anwander; Linda Chaabane; Maciej Orkisz; Bruno Neyran; Philippe Douek; Isabelle E. Magnin (MICCAI, 2001)

A New Method for the Registration of Cardiac PET and MR Images Using Deformable Model Based Segmentation of the Main Thorax Structures. - Timo Mäkelä; Patrick Clarysse; Jyrki Lötjönen; Outi Sipilä; Kirsi Lauerma; Helena Hänninen; Esa-Pekka Pyökkimies; Jukka Nenonen; Juhani Knuuti; Toivo Katila; Isabelle E. Magnin (MICCAI, 2001)

Modeling the 3D coronary tree for labeling purposes. - Claire Chalopin; Gérard Finet; Isabelle E. Magnin (Medical Image Anal., 2001)

3D objects visualization for remote interactive medical applications. - Johan Montagnat; Eduardo Davila; Isabelle E. Magnin (3DPVT, 2002)

Exploratory analysis of the spatio-temporal deformation of the myocardium during systole from tagged MRI. - Patrick Clarysse; Meimei Han; Pierre Croisille; Isabelle E. Magnin (IEEE Trans. Biomed. Eng., 2002)

A Review of Cardiac Image Registration Methods. - Timo Mäkelä; Patrick Clarysse; Outi Sipilä; Nicoleta Pauna; Quoc Cuong Pham; Toivo Katila; Isabelle E. Magnin (IEEE Trans. Medical Imaging, 2002)

DM2: A Distributed Medical Data Manager for Grids. - Hector Duque; Johan Montagnat; Jean-Marc Pierson; Lionel Brunie; Isabelle E. Magnin (CCGRID, 2003)

Using grid technologies to face medical image analysis challenges. - Johan Montagnat; Vincent Breton; Isabelle E. Magnin (CCGRID, 2003)

Evaluation and Comparison of Surface and Intensity Based Rigid Registration Methods for Thorax and Cardiac MR and PET Images. - Timo Mäkelä; Mika Pollari; Jyrki Lötjönen; Nicoleta Pauna; Anthonin Reilhac; Patrick Clarysse; Isabelle E. Magnin; Toivo Katila (FIMH, 2003)

Modeling and Tracking of the Cardiac Left Ventricular Motion by a State Space Harmonic Model in MRI Sequence. - Mohammed Oumsis; Quoc Cuong Pham; Abdelaziz D. Sdigui; Bruno Neyran; Isabelle E. Magnin (FIMH, 2003)

Towards ultrasound cardiac image segmentation based on the radiofrequency signal. - Igor Dydenko; Denis Friboulet; Jean-Marie Gorce; Jan D'hooge; Bart H. Bijnens; Isabelle E. Magnin (Medical Image Anal., 2003)

A 3-D model-based registration approach for the PET, MR and MCG cardiac data fusion. - Timo Mäkelä; Quoc Cuong Pham; Patrick Clarysse; Jukka Nenonen; Jyrki Lötjönen; Outi Sipilä; Helena Hänninen; Kirsi Lauerma; Juhani Knuuti; Toivo Katila; Isabelle E. Magnin (Medical Image Anal., 2003)

Stochastic nonlinear image restoration using the wavelet transform. - Marc C. Robini; Isabelle E. Magnin (IEEE Trans. Image Process., 2003)

Combined 3d object motion estimation in medical sequences. - Bertrand Delhay; Patrick Clarysse; Stéphane Bonnet; Pierre Grangeat; Isabelle E. Magnin (ICIP, 2004)

Automatic 2D Segmentation of the Left Ventricle in Tagged Cardiac MRI Using Motion Information. - Julien Milles; Anneke van Susteren; Theo Arts; Patrick Clarysse; Pierre Croisille; Isabelle E. Magnin (ISBI, 2004)

Texture based medical image indexing and retrieval: application to cardiac imaging. - Tristan Glatard; Johan Montagnat; Isabelle E. Magnin (Multimedia Information Retrieval, 2004)

Medical Images Simulation, Storage, and Processing on the European DataGrid Testbed. - Johan Montagnat; Fabrice Bellet; Hugues Benoit-Cattin; Vincent Breton; Lionel Brunie; Hector Duque; Yannick Legré; Isabelle E. Magnin; Lydia Maigne; Serge Miguet; Jean-Marc Pierson; Ludwig Seitz; et al. (J. Grid Comput., 2004)

Mesh-based video objects tracking combining motion and luminance discontinuities criteria. - Sébastien Valette; Isabelle E. Magnin; Rémy Prost (Signal Process., 2004)

Evaluation of Two Free Form Deformation Based Motion Estimators in Cardiac and Chest Imaging. - Bertrand Delhay; Patrick Clarysse; Jyrki Lötjönen; Toivo Katila; Isabelle E. Magnin (FIMH, 2005)

A Realistic Anthropomorphic Numerical Model of the Beating Heart. - Rana Haddad; Patrick Clarysse; Maciej Orkisz; Pierre Croisille; Didier Revel; Isabelle E. Magnin (FIMH, 2005)

Editorial. - Johan Montagnat; Patrick Clarysse; Jukka Nenonen; Toivo Katila; Isabelle E. Magnin (Medical Image Anal., 2005)

Correction of Bias Field in MR Images Using Singularity Function Analysis. - Jianhua Luo; Yuemin Zhu; Patrick Clarysse; Isabelle E. Magnin (IEEE Trans. Medical Imaging, 2005)

Segmentation and Quantification of Blood Vessels in 3D Images using a Right Generalized Cylinder State Model. - Leonardo Floréz-Valencia; Jacques Azencot; Fabrice Vincent; Maciej Orkisz; Isabelle E. Magnin (ICIP, 2006)

Coronary tree extraction from X-ray angiograms using marked point processes. - Caroline Lacoste; Gérard Finet; Isabelle E. Magnin (ISBI, 2006)

Evaluation of semi-automatic arterial stenosis quantification. - Marcela Hernández Hoyos; Jean-Michel Serfaty; Albinka Maghiar; Catherine Desbleds-Mansard; Maciej Orkisz; Isabelle E. Magnin; Philippe Douek (Int. J. Comput. Assist. Radiol. Surg., 2006)

A level set framework with a shape and motion prior for segmentation and region tracking in echocardiography. - Igor Dydenko; Fadi Jamal; Olivier Bernard 001; Jan D'hooge; Isabelle E. Magnin; Denis Friboulet (Medical Image Anal., 2006)

Volumetric mesh construction from scattered prior data: Application to cardiac MR image analysis. - Joël Schaerer; Arnaud Gelas; Rémy Prost; Patrick Clarysse; Isabelle E. Magnin (EUSIPCO, 2007)

Locally Adapted Spatio-temporal Deformation Model for Dense Motion Estimation in Periodic Cardiac Image Sequences. - Bertrand Delhay; Patrick Clarysse; Isabelle E. Magnin (FIMH, 2007)

Radial Basis Functions Collocation Methods for Model Based Level-Set Segmentation. - Arnaud Gelas; Joël Schaerer; Olivier Bernard 001; Denis Friboulet; Patrick Clarysse; Isabelle E. Magnin; Rémy Prost (ICIP (2), 2007)

A robust algorithm based on nonstationary degree for ultrasonic data enhancement. - Wanyu Liu; Zhang Yanli; Liu Wenhui; Shan Hu; Yuemin Zhu; Isabelle E. Magnin (SMC, 2007)

MRI intensity nonuniformity correction using simultaneously spatial and gray-level histogram information. - Julien Milles; Yue Min Zhu; Gérard Gimenez; Charles R. G. Guttmann; Isabelle E. Magnin (Comput. Medical Imaging Graph., 2007)

A Stochastic Continuation Approach to Piecewise Constant Reconstruction. - Marc C. Robini; A. Lachal; Isabelle E. Magnin (IEEE Trans. Image Process., 2007)

A Neural Network-Based Approach to Motion Estimation with Discontinuities. - Mohamed Berkane; Patrick Clarysse; Isabelle E. Magnin (HIS, 2008)

Spatio-temporal Summarizing Method of Periodic Image Sequences with Kohonen Maps. - Mohamed Berkane; Patrick Clarysse; Isabelle E. Magnin (ICANN (1), 2008)

Edge-Preserving Image Reconstruction with Wavelet-Domain Edge Continuation. - Marc C. Robini; Pierre-Jean Viverge; Yue-Min Zhu; Isabelle E. Magnin (ICIAR, 2009)

Denoising by Averaging Reconstructed Images: Application to Magnetic Resonance Images. - Jianhua Luo; Yuemin Zhu; Isabelle E. Magnin (IEEE Trans. Biomed. Eng., 2009)

Optimization by Stochastic Continuation. - Marc C. Robini; Isabelle E. Magnin (SIAM J. Imaging Sci., 2010)

Adaptive diffusion basis functions decomposition for estimating intra-voxel myocardium fiber geometry. - Chunyu Chu; Wanyu Liu; Isabelle E. Magnin; Yuemin Zhu (BMEI, 2011)

Simulation of Diffusion Anisotropy in DTI for Virtual Cardiac Fiber Structure. - Lihui Wang 002; Yue-Min Zhu; Hongying Li; Wanyu Liu; Isabelle E. Magnin (FIMH, 2011)

Variability of the Human Cardiac Laminar Structure. - Herve Lombaert; Jean-Marc Peyrat; Laurent Fanton; Farida Cheriet; Hervé Delingette; Nicholas Ayache; Patrick Clarysse; Isabelle E. Magnin; Pierre Croisille (STACOM, 2011)

Statistical Atlas of Human Cardiac Fibers: Comparison with Abnormal Hearts. - Herve Lombaert; Jean-Marc Peyrat; Laurent Fanton; Farida Cheriet; Hervé Delingette; Nicholas Ayache; Patrick Clarysse; Isabelle E. Magnin; Pierre Croisille (STACOM, 2011)

Automatic detection of abnormal vascular cross-sections based on density level detection and support vector machines. - Maria A. Zuluaga; Isabelle E. Magnin; Marcela Hernández Hoyos; Edgar J. F. Delgado Leyton; Fernando Lozano; Maciej Orkisz (Int. J. Comput. Assist. Radiol. Surg., 2011)

Feature-based interpolation of diffusion tensor fields and application to human cardiac DT-MRI. - Feng Yang 010; Yue-Min Zhu; Isabelle E. Magnin; Jianhua Luo; Pierre Croisille; Peter B. Kingsley (Medical Image Anal., 2012)

Multiscale Modeling and Simulation of the Cardiac Fiber Architecture for DMRI. - Lihui Wang 002; Yuemin Zhu; Hongying Li; Wanyu Liu; Isabelle E. Magnin (IEEE Trans. Biomed. Eng., 2012)

Human Atlas of the Cardiac Fiber Architecture: Study on a Healthy Population. - Herve Lombaert; Jean-Marc Peyrat; Pierre Croisille; Stanislas Rapacchi; Laurent Fanton; Farida Cheriet; Patrick Clarysse; Isabelle E. Magnin; Hervé Delingette; Nicholas Ayache (IEEE Trans. Medical Imaging, 2012)

High Resolution Extraction of Local Human Cardiac Fibre Orientations. - François Varray; Lihui Wang 002; Laurent Fanton; Yue-Min Zhu; Isabelle E. Magnin (FIMH, 2013)

Feature-Preserving Smoothing of Diffusion Weighted Images Using Nonstationarity Adaptive Filtering. - Yan-Li Zhang; Wanyu Liu; Isabelle E. Magnin; Yue-Min Zhu (IEEE Trans. Biomed. Eng., 2013)

Simulation of dynamic DTI of 3D cardiac fiber structures. - Lihui Wang 002; Yue-Min Zhu; Feng Yang 010; Wanyu Liu; Isabelle E. Magnin (ISBI, 2014)

Very High-Resolution Imaging of Post-Mortem Human Cardiac Tissue Using X-Ray Phase Contrast Tomography. - Iulia Mirea; François Varray; Yue Min Zhu; Laurent Fanton; Max Langer; Pierre-Simon Jouk; Gabrielle Michalowicz; Yves Usson; Isabelle E. Magnin (FIMH, 2015)

Cardiac Fiber Unfolding by Semidefinite Programming. - Hongying Li; Marc C. Robini; Feng Yang 010; Isabelle E. Magnin; Yue Min Zhu (IEEE Trans. Biomed. Eng., 2015)

A stochastic framework for spot-scanning particle therapy. - Marc C. Robini; Yuemin Zhu; Wanyu Liu; Isabelle E. Magnin (EMBC, 2016)

Extraction of the 3D local orientation of myocytes in human cardiac tissue using X-ray phase-contrast micro-tomography and multi-scale analysis. - François Varray; Iulia Mirea; Max Langer; Françoise Peyrin; Laurent Fanton; Isabelle E. Magnin (Medical Image Anal., 2017)

Investigating the 3D Local Myocytes Arrangement in the Human LV Mid-Wall with the Transverse Angle. - Shunli Wang 004; Iulia Mirea; François Varray; Wanyu Liu; Isabelle E. Magnin (FIMH, 2019)

Compressed Sensing Magnetic Resonance Imaging Using Data-Driven Tight Frame and Total Generalized Variation. - Jian-Ping Huang; Lihui Wang 002; Chunyu Chu; Wanyu Liu; Isabelle E. Magnin; Yuemin Zhu (J. Medical Imaging Health Informatics, 2019)

A Methodology for Accessing the Local Arrangement of the Sheetlets that Make up the Extracellular Heart Tissue. - Shunli Wang 004; François Varray; Feng Yuan; Isabelle E. Magnin (FIMH, 2021)

Measurement of local orientation of cardiomyocyte aggregates in human left ventricle free wall samples using X-ray phase-contrast microtomography. - Shunli Wang 004; François Varray; Wanyu Liu; Patrick Clarysse; Isabelle E. Magnin (Medical Image Anal., 2022)