InterPep2: global peptide-protein docking using interaction surface templates. - Isak Johansson-Åkhe; Claudio Mirabello; Björn Wallner (Bioinform., 2020)

InterPepRank: Assessment of Docked Peptide Conformations by a Deep Graph Network. - Isak Johansson-Åkhe; Claudio Mirabello; Björn Wallner (Frontiers Bioinform., 2021)

InterPepScore: a deep learning score for improving the FlexPepDock refinement protocol. - Isak Johansson-Åkhe; Björn Wallner (Bioinform., 2022)

Improving peptide-protein docking with AlphaFold-Multimer using forced sampling. - Isak Johansson-Åkhe; Björn Wallner (Frontiers Bioinform., 2022)