Arquitectura para la Mediación Semántica. - José Francisco Aldana Montes; Ismael Navas-Delgado; María del Mar Roldán García (JISBD, 2003)

Anotación Semántica de Documentos Web. - José Francisco Aldana Montes; Nathalie Moreno Vergara; Ismael Navas-Delgado (JISBD, 2003)

Putting the Semantic Web to Work with DB Technology. - Nathalie Moreno Vergara; Ismael Navas-Delgado; José Francisco Aldana Montes (IEEE Data Eng. Bull., 2003)

Kreios: Towards Semantic Interoperable Systems. - Ismael Navas-Delgado; María del Mar Roldán García; José Francisco Aldana Montes (ADVIS, 2004)

An Open Architecture for the Dynamic Integration of Biological Data Sources. - José Francisco Aldana Montes; Manuel Hidalgo-Conde; Ismael Navas-Delgado; María del Mar Roldán García; Pedro A. de Alarcón; Oswaldo Trelles (CCCT (1), 2004)

Embedding Semantic Annotations into Dynamic Web Contents. - Ismael Navas-Delgado; Nathalie Moreno Vergara; Antonio C. Gomez Lora; María del Mar Roldán García; Iván Ruiz Mostazo; José Francisco Aldana Montes (DEXA Workshops, 2004)

Semantic Integration of Digital Libraries. - José Francisco Aldana Montes; Ismael Navas-Delgado; María del Mar Roldán García (ICEIS (5), 2004)

Towards Conceptual Mediation: A Semantic Architecture For Dynamic Integration of Heterogeneous Databases. - Ismael Navas-Delgado; José Francisco Aldana Montes (ICEIS (1), 2004)

Solving Queries over Semantically Integrated Biological Data Sources. - José Francisco Aldana Montes; Ismael Navas-Delgado; María del Mar Roldán García (WAIM, 2004)

Deep Crawling in the Semantic Web: In Search of Deep Knowledge. - Ismael Navas-Delgado; María del Mar Roldán García; José Francisco Aldana Montes (WISE, 2004)

Database Technologies on the Web. - José Francisco Aldana Montes; Antonio C. Gomez Lora; Nathalie Moreno Vergara; Ismael Navas-Delgado; María del Mar Roldán García (Encyclopedia of Information Science and Technology (II), 2005)

Applying Database Techniques to the Semantic Web. - María del Mar Roldán García; Ismael Navas-Delgado; José Francisco Aldana Montes (Encyclopedia of Database Technologies and Applications, 2005)

Automatic Generation of Semantic Fields for Resource Discovery in the Semantic Web. - Ismael Navas-Delgado; Ismael Sanz; José Francisco Aldana Montes; Rafael Berlanga Llavori (DEXA, 2005)

Bio-Broker: a biological data and services mediator system. - José Francisco Aldana Montes; Manuel Hidalgo-Conde; Ismael Navas-Delgado; María del Mar Roldán García; Oswaldo Trelles (IADIS AC, 2005)

A semantic tool for analyzing interaction among transcription factors. - Ismael Navas-Delgado; Carlos Rodríguez-Caso; María del Mar Roldán García; Miguel Angel Medina; José Francisco Aldana Montes (IADIS AC, 2005)

A Design Methodology for Semantic Web Database-Based Systems. - María del Mar Roldán García; Ismael Navas-Delgado; José Francisco Aldana Montes (ICITA (1), 2005)

Arquitectura para la Clasificación y Composición de Servicios Web. - Ismael Navas-Delgado; Maria del Mar Rojano-Muñoz; José Francisco Aldana Montes (JISBD, 2005)

Services Integration and Task-scheduling in Bioinformatics Grids. - Sergio Ramírez; Enrique de-Andrés; Ismael Navas-Delgado; Antonio J. Pérez-Pulido; José Francisco Aldana Montes; Oswaldo Trelles (PARCO, 2005)

Distributed Execution of Workflows in the INB. - Ismael Navas-Delgado; Antonio J. Pérez-Pulido; José Francisco Aldana Montes; Oswaldo Trelles (DILS, 2006)

Distributed Execution of Workflows. - Ismael Navas-Delgado; José Francisco Aldana Montes; Oswaldo Trelles (International Conference on Computational Science (3), 2006)

Automated Discovery of Compositions of Services Described with Separate Ontologies. - Antonio Brogi; Sara Corfini; José Francisco Aldana Montes; Ismael Navas-Delgado (ICSOC, 2006)

A Prototype for Discovering Compositions of Semantic Web Services. - Antonio Brogi; Sara Corfini; José Francisco Aldana Montes; Ismael Navas-Delgado (SWAP, 2006)

Intelligent client for integrating bioinformatics services. - Ismael Navas-Delgado; Maria del Mar Rojano-Muñoz; Sergio Ramírez; Antonio J. Pérez-Pulido; Eduardo Andrés León; José Francisco Aldana Montes; Oswaldo Trelles (Bioinform., 2006)

Bio-Broker: a tool for integration of biological data sources and data analysis tools. - José Francisco Aldana Montes; M. Roldán-Castro; Ismael Navas-Delgado; María del Mar Roldán García; Manuel Hidalgo-Conde; Oswaldo Trelles (Softw. Pract. Exp., 2006)

Comparison of Textual Renderings of Ontologies for Improving Their Alignment. - Jorge Martinez-Gil; Ismael Navas-Delgado; Antonio Polo Márquez; José Francisco Aldana Montes (CISIS, 2008)

VSB: The Visual Semantic Browser. - Ismael Navas-Delgado; Amine Kerzazi; Othmane Chniber; José Francisco Aldana Montes (KES (3), 2008)

SD-Core: Generic Semantic Middleware Components for the Semantic Web. - Ismael Navas-Delgado; José Francisco Aldana Montes (KES (2), 2008)

SD-Core: A Semantic Middleware Applied to Molecular Biology. - Ismael Navas-Delgado; Amine Kerzazi; Othmane Chniber; José Francisco Aldana Montes (OTM Workshops, 2008)

A Semantic Mediation Architecture for RDF Data Integration. - Amine Kerzazi; Ismael Navas-Delgado; José Francisco Aldana Montes; Othmane Chniber (SWAP, 2008)

KASBi: Knowledge-Based Analysis in Systems Biology. - María del Mar Roldán García; Ismael Navas-Delgado; Amine Kerzazi; Othmane Chniber; Joaquin J. Molina-Castro; José Francisco Aldana Montes (SWAT4LS, 2008)

AMMO-Prot: amine system project 3D-model finder. - Ismael Navas-Delgado; Raúl Montañez; Almudena Pino-Ángeles; Aurelio A. Moya-García; José Luis Urdiales; Francisca Sánchez-Jiménez; José Francisco Aldana Montes (BMC Bioinform., 2008)

The Amine System Project: Systems Biology in Practice. - Ismael Navas-Delgado; Raúl Montañez; Miguel Angel Medina; José Luis Urdiales; José Francisco Aldana Montes; Francisca Sánchez-Jiménez (Computational Intelligence in Bioinformatics, 2008)

Semantic Fields: Finding Ontology Relationships. - Ismael Navas-Delgado; María del Mar Roldán García; José Francisco Aldana Montes (DEXA, 2009)

Towards an Ontology-based Mediation Framework for Integrating Biological Data. - Amine Kerzazi; Ismael Navas-Delgado; José Francisco Aldana Montes (SWAT4LS, 2009)

Systems biology metabolic modeling assistant: an ontology-based tool for the integration of metabolic data in kinetic modeling. - Armando Reyes-Palomares; Raúl Montañez; Alejandro Real-Chicharro; Othmane Chniber; Amine Kerzazi; Ismael Navas-Delgado; Miguel Angel Medina; José Francisco Aldana Montes; Francisca Sánchez-Jiménez (Bioinform., 2009)

KA-SB: from data integration to large scale reasoning. - María del Mar Roldán García; Ismael Navas-Delgado; Amine Kerzazi; Othmane Chniber; Joaquin J. Molina-Castro; José Francisco Aldana Montes (BMC Bioinform., 2009)

Protopia: a protein-protein interaction tool. - Alejandro Real-Chicharro; Iván Ruiz Mostazo; Ismael Navas-Delgado; Amine Kerzazi; Othmane Chniber; Francisca Sánchez-Jiménez; Miguel Angel Medina; José Francisco Aldana Montes (BMC Bioinform., 2009)

Extending SD-Core for Ontology-based Data Integration. - Ismael Navas-Delgado; José Francisco Aldana Montes (J. Univers. Comput. Sci., 2009)

A Data Warehouse Approach to Semantic Integration of Pseudomonas Data. - Kamar Marrakchi; Abdelaali Briache; Amine Kerzazi; Ismael Navas-Delgado; José Francisco Aldana Montes; Mohamed Ettayebi; Khalid Lairini; Badr Din Rossi Hassani (DILS, 2010)

SB-KOM: Integration of Pathway Information with BioPax. - María Jesús García-Godoy; Ismael Navas-Delgado; José Francisco Aldana Montes (JBI, 2010)

YeastMed: an XML-Based System for Biological Data Integration of Yeast. - Abdelaali Briache; Kamar Marrakchi; Amine Kerzazi; Ismael Navas-Delgado; José Francisco Aldana Montes; Badr Din Rossi Hassani; Khalid Lairini (SWAT4LS, 2010)

Bioqueries: a social community sharing experiences while querying biological linked data. - María Jesús García-Godoy; Ismael Navas-Delgado; José Francisco Aldana Montes (SWAT4LS, 2011)

Social pathway annotation: extensions of the systems biology metabolic modelling assistant. - Ismael Navas-Delgado; Alejandro Real-Chicharro; Miguel Angel Medina; Francisca Sánchez-Jiménez; José Francisco Aldana Montes (Briefings Bioinform., 2011)

Metabolic Pathway Data and Application Integration. - Ismael Navas-Delgado; María Jesús García-Godoy; José Francisco Aldana Montes (PAAMS (Workshops), 2012)

Transparent mediation-based access to multiple yeast data sources using an ontology driven interface. - Abdelaali Briache; Kamar Marrakchi; Amine Kerzazi; Ismael Navas-Delgado; Badr Din Rossi Hassani; Khalid Lairini; José Francisco Aldana Montes (BMC Bioinform., 2012)

MaF: An Ontology Matching Framework. - Jorge Martinez-Gil; Ismael Navas-Delgado; José Francisco Aldana Montes (J. Univers. Comput. Sci., 2012)

Sharing and executing linked data queries in a collaborative environment. - María Jesús García-Godoy; Esteban López-Camacho; Ismael Navas-Delgado; José Francisco Aldana Montes (Bioinform., 2013)

BioSStore: A Client Interface for a Repository of Semantically Annotated Bioinformatics Web Services. - Ismael Navas-Delgado; José Francisco Aldana Montes (Open J. Semantic Web, 2014)

kpath: integration of metabolic pathway linked data. - Ismael Navas-Delgado; María Jesús García-Godoy; Esteban López-Camacho; Maciej Rybinski; Armando Reyes-Palomares; Miguel Angel Medina; José Francisco Aldana Montes (Database J. Biol. Databases Curation, 2015)

A Repository of Semantic Open EHR Archetypes. - Fernando Sánchez; Samuel Benavides; Fernando Moreno; Guillermo Garzón; María del Mar Roldán García; Ismael Navas-Delgado; José Francisco Aldana Montes (Int. J. Interact. Multim. Artif. Intell., 2015)

Re-constructing Hidden Semantic Data Models by Querying SPARQL Endpoints. - María Jesús García-Godoy; Esteban López-Camacho; Ismael Navas-Delgado; José Francisco Aldana Montes (DEXA (1), 2016)

Dynamic Multi-Objective Optimization with jMetal and Spark: A Case Study. - José A. Cordero; Antonio J. Nebro; Cristóbal Barba-González; Juan José Durillo; José García-Nieto; Ismael Navas-Delgado; José Francisco Aldana Montes (MOD, 2016)

A Fine Grain Sentiment Analysis with Semantics in Tweets. - Cristóbal Barba-González; José García-Nieto; Ismael Navas-Delgado; José Francisco Aldana Montes (Int. J. Interact. Multim. Artif. Intell., 2016)

Melanoma expression analysis with Big Data technologies. - Alicia Fernandez-Rovira; Rocio Lavado-Valenzuela; Miguel Ángel Guerrero-Martinez; Ismael Navas-Delgado; José Francisco Aldana Montes (PeerJ Prepr., 2017)

jMetalSP: A framework for dynamic multi-objective big data optimization. - Cristóbal Barba-González; José García-Nieto; Antonio J. Nebro; José A. Cordero; Juan José Durillo; Ismael Navas-Delgado; José Francisco Aldana Montes (Appl. Soft Comput., 2018)

VIGLA-M: visual gene expression data analytics. - Ismael Navas-Delgado; José García-Nieto; Esteban López-Camacho; Maciej Rybinski; Rocio Lavado-Valenzuela; Miguel Ángel Berciano Guerrero; José Francisco Aldana Montes (BMC Bioinform., 2019)

BIGOWL: Knowledge centered Big Data analytics. - Cristóbal Barba-González; José García-Nieto; María del Mar Roldán García; Ismael Navas-Delgado; Antonio J. Nebro; José Francisco Aldana Montes (Expert Syst. Appl., 2019)

Reconstruction of gene regulatory networks with multi-objective particle swarm optimisers. - Sandro Hurtado; José García-Nieto; Ismael Navas-Delgado; Antonio J. Nebro; José Francisco Aldana Montes (Appl. Intell., 2021)

FIMED: Flexible management of biomedical data. - Sandro Hurtado; José García-Nieto; Ismael Navas-Delgado; José Francisco Aldana Montes (Comput. Methods Programs Biomed., 2021)

Injecting domain knowledge in multi-objective optimization problems: A semantic approach. - Cristóbal Barba-González; Antonio J. Nebro; José García-Nieto; María del Mar Roldán García; Ismael Navas-Delgado; José Francisco Aldana Montes (Comput. Stand. Interfaces, 2021)

TITAN: A knowledge-based platform for Big Data workflow management. - Antonio Benítez-Hidalgo; Cristóbal Barba-González; José García-Nieto; Pedro Gutiérrez-Moncayo; Manuel Paneque; Antonio J. Nebro; María del Mar Roldán García; José Francisco Aldana Montes; Ismael Navas-Delgado (Knowl. Based Syst., 2021)

A Service for Flexible Management and Analysis of Heterogeneous Clinical Data. - Sandro Hurtado; José García-Nieto; Ismael Navas-Delgado (IWBBIO (1), 2022)

On the Use of Explainable Artificial Intelligence for the Differential Diagnosis of Pigmented Skin Lesions. - Sandro Hurtado; Hossein Nematzadeh; José García-Nieto; Miguel Ángel Berciano Guerrero; Ismael Navas-Delgado (IWBBIO (1), 2022)

Automatic frequency-based feature selection using discrete weighted evolution strategy. - Hossein Nematzadeh; José García-Nieto; Ismael Navas-Delgado; José Francisco Aldana Montes (Appl. Soft Comput., 2022)

Advancing Climate Change Resilience through Ecosystems and Biodiversity Monitoring and Analysis. - María Luisa Antequera-Gómez; Cristóbal Barba-González; Ismael Navas-Delgado (ERCIM News, 2023)

Ensemble-based genetic algorithm explainer with automized image segmentation: A case study on melanoma detection dataset. - Hossein Nematzadeh; José García-Nieto; Ismael Navas-Delgado; José Francisco Aldana Montes (Comput. Biol. Medicine, 2023)

GENECI: A novel evolutionary machine learning consensus-based approach for the inference of gene regulatory networks. - Adrián Segura-Ortiz; José García-Nieto; José Francisco Aldana Montes; Ismael Navas-Delgado (Comput. Biol. Medicine, 2023)

KNIT: Ontology reusability through knowledge graph exploration. - Jorge Rodríguez-Revello; Cristóbal Barba-González; Maciej Rybinski; Ismael Navas-Delgado (Expert Syst. Appl., 2023)

SALON ontology for the formal description of sequence alignments. - Antonio Benítez-Hidalgo; José Francisco Aldana Montes; Ismael Navas-Delgado; María del Mar Roldán García (BMC Bioinform., 2023)

Scalable approach for high-resolution land cover: a case study in the Mediterranean Basin. - Antonio Manuel Burgueño; José F. Aldana-Martín; María Vázquez-Pendón; Cristóbal Barba-González; Yaiza Jiménez Gómez; Virginia E. García-Millán; Ismael Navas-Delgado (J. Big Data, 2023)

NORA: Scalable OWL reasoner based on NoSQL databases and Apache Spark. - Antonio Benítez-Hidalgo; Ismael Navas-Delgado; María del Mar Roldán García (Softw. Pract. Exp., 2023)

YOKO ONtO: You only KNIT One Ontology. - Jorge Rodríguez-Revello; Cristóbal Barba-González; Maciej Rybinski; Ismael Navas-Delgado (KGSWC, 2024)

Multi-objective context-guided consensus of a massive array of techniques for the inference of Gene Regulatory Networks. - Adrián Segura-Ortiz; José García-Nieto; José Francisco Aldana Montes; Ismael Navas-Delgado (Comput. Biol. Medicine, 2024)

Pattern recognition frequency-based feature selection with multi-objective discrete evolution strategy for high-dimensional medical datasets. - Hossein Nematzadeh; José García-Nieto; José Francisco Aldana Montes; Ismael Navas-Delgado (Expert Syst. Appl., 2024)

e-Science workflow: A semantic approach for airborne pollen prediction. - Sandro Hurtado; María Luisa Antequera-Gómez; Cristóbal Barba-González; Antonio Picornell; Ismael Navas-Delgado (Knowl. Based Syst., 2024)

Feature selection using a classification error impurity algorithm and an adaptive genetic algorithm improved with an external repository. - Hossein Nematzadeh; José García-Nieto; Ismael Navas-Delgado; José Francisco Aldana Montes (Knowl. Based Syst., 2024)

A deep learning LSTM-based approach for forecasting annual pollen curves: Olea and Urticaceae pollen types as a case study. - Antonio Picornell; Sandro Hurtado; María Luisa Antequera-Gómez; Cristóbal Barba-González; Rocío Ruiz-Mata; Enrique de Gálvez-Montañez; Marta Recio; María del Mar Trigo; José Francisco Aldana Montes; Ismael Navas-Delgado (Comput. Biol. Medicine, 2024)

BIGOWL4DQ: Ontology-driven approach for Big Data quality meta-modelling, selection and reasoning. - Cristóbal Barba-González; Ismael Caballero 001; Ángel Jesús Varela-Vaca; José A. Cruz-Lemus; María Teresa Gómez-López; Ismael Navas-Delgado (Inf. Softw. Technol., 2024)

Model-agnostic local explanation: Multi-objective genetic algorithm explainer. - Hossein Nematzadeh; José García-Nieto; Sandro Hurtado; José Francisco Aldana Montes; Ismael Navas-Delgado (Eng. Appl. Artif. Intell., 2025)

Advancing soil biology research: Empowering European databases with ontological frameworks for enhanced data integration of soil biodiversity data. - José F. Aldana-Martín; David J. Russell; Carlos A. Martínez-Muñoz; Christine Driller; Stephan Lesch; Ismael Navas-Delgado (Ecol. Informatics, 2025)

Semantic-Driven Workflow Automation for Large-Scale Data Analytics. - Cristóbal Barba-González; José Francisco Aldana Montes; Ismael Navas-Delgado (ERCIM News, 2025)