Otomatik gürbüz bölütleme ile uyluk MR imgelerinde kas ve yağ miktarlarının belirlenmesi (Quantification of muscle and fat volumes in the thigh MR images using automatic robust segmentation) - Ismail Irmakci (2017)

Deep Learning for Musculoskeletal Image Analysis. - Ismail Irmakci; Syed Muhammad Anwar; Drew A. Torigian; Ulas Bagci (ACSSC, 2019)

A Novel Extension to Fuzzy Connectivity for Body Composition Analysis: Applications in Thigh, Brain, and Whole Body Tissue Segmentation. - Ismail Irmakci; Sarfaraz Hussein; Aydogan Savran; Rita R. Kalyani; David A. Reiter; Chee W. Chia; Kenneth W. Fishbein; Richard G. S. Spencer; Luigi Ferrucci; Ulas Bagci (IEEE Trans. Biomed. Eng., 2019)

Information Bottleneck Attribution for Visual Explanations of Diagnosis and Prognosis. - Ugur Demir; Ismail Irmakci; Elif Keles; Ahmet Topcu; Ziyue Xu 001; Concetto Spampinato; Sachin Jambawalikar; Evrim Turkbey; Baris Turkbey; Ulas Bagci (MLMI@MICCAI, 2021)

Hierarchical 3D Feature Learning forPancreas Segmentation. - Federica Proietto Salanitri; Giovanni Bellitto; Ismail Irmakci; Simone Palazzo; Ulas Bagci; Concetto Spampinato (MLMI@MICCAI, 2021)

Hierarchical 3D Feature Learning for Pancreas Segmentation. - Federica Proietto Salanitri; Giovanni Bellitto; Ismail Irmakci; Simone Palazzo; Ulas Bagci; Concetto Spampinato (CoRR, 2021)

Capsules for biomedical image segmentation. - Rodney LaLonde; Ziyue Xu 001; Ismail Irmakci; Sanjay Jain 002; Ulas Bagci (Medical Image Anal., 2021)

Multi-Contrast MRI Segmentation Trained on Synthetic Images. - Ismail Irmakci; Zeki Emre Unel; Nazli Ikizler-Cinbis; Ulas Bagci (EMBC, 2022)

Neural Transformers for Intraductal Papillary Mucosal Neoplasms (IPMN) Classification in MRI images. - Federica Proietto Salanitri; Giovanni Bellitto; Simone Palazzo; Ismail Irmakci; Michael B. Wallace; Candice W. Bolan; Megan Engels; Sanne Hoogenboom; Marco Aldinucci; Ulas Bagci; Daniela Giordano; Concetto Spampinato (EMBC, 2022)

Semi-Supervised Deep Learning for Multi-Tissue Segmentation from Multi-Contrast MRI. - Syed Muhammad Anwar; Ismail Irmakci; Drew A. Torigian; Sachin Jambawalikar; Georgios Z. Papadakis; Can Akgun; Jutta Ellermann; Mehmet Akçakaya; Ulas Bagci (J. Signal Process. Syst., 2022)