Protein contact prediction using metagenome sequence data and residual neural networks. - Qi Wu 016; Zhenling Peng; Ivan Anishchenko; Qian Cong; David Baker 001; Jianyi Yang 002 (Bioinform., 2020)

Characterizing and explaining the impact of disease-associated mutations in proteins without known structures or structural homologs. - Neeladri Sen; Ivan Anishchenko; Nicola Bordin; Ian Sillitoe; Sameer Velankar; David Baker 001; Christine A. Orengo (Briefings Bioinform., 2022)

RFDesign: Protein hallucination and inpainting with RosettaFold. - Jue Wang; Sidney Lisanza; David Juergens; Doug Tischer; Joe Watson; Ivan Anishchenko; Minkyung Baek; Justas Dauparas; Sergey Ovchinnikov (Zenodo, 2022)