Local Decoding of Sequences and Alignment-Free Comparison. - Gilles Didier; Ivan Laprevotte; Maude Pupin; Alain Hénaut (J. Comput. Biol., 2006)

Comparing sequences without using alignments: application to HIV/SIV subtyping. - Gilles Didier; Laurent Debomy; Maude Pupin; Ming Zhang; Alexander Grossmann; Claudine Devauchelle; Ivan Laprevotte (BMC Bioinform., 2007)

MS4 - Multi-Scale Selector of Sequence Signatures: An alignment-free method for classification of biological sequences. - Eduardo Corel; Florian Pitschi; Ivan Laprevotte; Gilles Grasseau; Gilles Didier; Claudine Devauchelle (BMC Bioinform., 2010)

Variable length local decoding and alignment-free sequence comparison. - Gilles Didier; Eduardo Corel; Ivan Laprevotte; Alexander Grossmann; Claudine Landès-Devauchelle (Theor. Comput. Sci., 2012)