Inferring missing genotypes in large SNP panels using fast nearest-neighbor searches over sliding windows. - Adam Roberts; Leonard McMillan; Wei Wang 010; Joel Parker; Ivan Rusyn; David Threadgill (ISMB/ECCB (Supplement of Bioinformatics), 2007)

Supporting Computational Systems Science: Genomic Analysis Tool Federations Using Aspects and AOP. - David Stotts; Keith L. Lee; Ivan Rusyn (ISBRA, 2008)

FastMap: Fast eQTL mapping in homozygous populations. - Daniel M. Gatti; Andrey A. Shabalin; Tieu-Chong Lam; Fred A. Wright; Ivan Rusyn; Andrew B. Nobel (Bioinform., 2009)

SAFEGUI: resampling-based tests of categorical significance in gene expression data made easy. - Daniel M. Gatti; Myroslav Sypa; Ivan Rusyn; Fred A. Wright; William T. Barry (Bioinform., 2009)

ToxPi GUI: an interactive visualization tool for transparent integration of data from diverse sources of evidence. - David M. Reif; Myroslav Sypa; Eric F. Lock; Fred A. Wright; Ander Wilson; Tommy Cathey; Richard S. Judson; Ivan Rusyn (Bioinform., 2013)

Cheminformatics-aided pharmacovigilance: application to Stevens-Johnson Syndrome. - Yen S. Low; Ola Caster; Tomas Bergvall; Denis Fourches; Xiaoling Zang; G. Niklas Norén; Ivan Rusyn; I. Ralph Edwards; Alexander Tropsha (J. Am. Medical Informatics Assoc., 2016)

ToxPi Graphical User Interface 2.0: Dynamic exploration, visualization, and sharing of integrated data models. - Skylar W. Marvel; Kimberly To; Fabian A. Grimm; Fred A. Wright; Ivan Rusyn; David M. Reif (BMC Bioinform., 2018)

Chemistry-Wide Association Studies (CWAS): A Novel Framework for Identifying and Interpreting Structure-Activity Relationships. - Yen S. Low; Vinicius M. Alves; Denis Fourches; Alexander Sedykh; Carolina Horta Andrade; Eugene N. Muratov; Ivan Rusyn; Alexander Tropsha (J. Chem. Inf. Model., 2018)