Comb-p: software for combining, analyzing, grouping and correcting spatially correlated P-values. - Brent S. Pedersen; David A. Schwartz; Ivana V. Yang; Katerina J. Kechris (Bioinform., 2012)

CruzDB: software for annotation of genomic intervals with UCSC genome-browser database. - Brent S. Pedersen; Ivana V. Yang; Subhajyoti De (Bioinform., 2013)