PBC: A Software Framework Facilitating Pattern-Based Clustering for Microarray Data Analysis. - Dong-Guk Shin; Seung-Hyun Hong; Pujan Joshi; Ravi Nori; Baikang Pei; Hsin-Wei Wang; Patrick Harrington; Lynn Kuo; Ivo Kalajzic; David W. Rowe (IJCBS, 2009)

A systems biology approach to the identification and analysis of transcriptional regulatory networks in osteocytes. - Angela K. Dean; Stephen E. Harris; Ivo Kalajzic; Jianhua Ruan (BMC Bioinform., 2009)

A software framework integrating gene expression patterns, binding site analysis and gene ontology to hypothesize gene regulation relationships. - Pujan Joshi; Baikang Pei; Seung-Hyun Hong; Ivo Kalajzic; Dong-Ju Shin; David W. Rowe; Dong-Guk Shin (BIBM, 2013)