Evaluation of Parallel Communication Models in Nekbone, a Nek5000 Mini-Application. - Ilya Ivanov; Jing Gong; Dana Akhmetova; Ivy Bo Peng; Stefano Markidis; Erwin Laure; Rui Machado; Mirko Rahn; Valeria Bartsch; Alistair Hart; Paul F. Fischer (CLUSTER, 2015)

The Cost of Synchronizing Imbalanced Processes in Message Passing Systems. - Ivy Bo Peng; Stefano Markidis; Erwin Laure (CLUSTER, 2015)

The Formation of a Magnetosphere with Implicit Particle-in-Cell Simulations. - Ivy Bo Peng; Stefano Markidis; Andris Vaivads; Juris Vencels; Jorge Amaya; Andrey Divin; Erwin Laure; Giovanni Lapenta (ICCS, 2015)

Spectral Solver for Multi-scale Plasma Physics Simulations with Dynamically Adaptive Number of Moments. - Juris Vencels; Gian Luca Delzanno; Alec Johnson; Ivy Bo Peng; Erwin Laure; Stefano Markidis (ICCS, 2015)

A data streaming model in MPI. - Ivy Bo Peng; Stefano Markidis; Erwin Laure; Daniel J. Holmes; Mark Bull (ExaMPI@SC, 2015)

Exploring Application Performance on Emerging Hybrid-Memory Supercomputers. - Ivy Bo Peng; Stefano Markidis; Erwin Laure; Gokcen Kestor; Roberto Gioiosa (HPCC/SmartCity/DSS, 2016)

Idle Period Propagation in Message-Passing Applications. - Ivy Bo Peng; Stefano Markidis; Erwin Laure; Gokcen Kestor; Roberto Gioiosa (HPCC/SmartCity/DSS, 2016)

A Performance Characterization of Streaming Computing on Supercomputers. - Stefano Markidis; Ivy Bo Peng; Roman Iakymchuk; Erwin Laure; Gokcen Kestor; Roberto Gioiosa (ICCS, 2016)

The EPiGRAM Project: Preparing Parallel Programming Models for Exascale. - Stefano Markidis; Ivy Bo Peng; Jesper Larsson Träff; Antoine Rougier; Valeria Bartsch; Rui Machado; Mirko Rahn; Alistair Hart; Daniel J. Holmes; Mark Bull; Erwin Laure (ISC Workshops, 2016)

Extending Message Passing Interface Windows to Storage. - Sergio Rivas-Gomez; Stefano Markidis; Ivy Bo Peng; Erwin Laure; Gokcen Kestor; Roberto Gioiosa (CCGrid, 2017)

Preparing HPC Applications for the Exascale Era: A Decoupling Strategy. - Ivy Bo Peng; Roberto Gioiosa; Gokcen Kestor; Erwin Laure; Stefano Markidis (ICPP, 2017)

Exploring the Performance Benefit of Hybrid Memory System on HPC Environments. - Ivy Bo Peng; Roberto Gioiosa; Gokcen Kestor; Pietro Cicotti; Erwin Laure; Stefano Markidis (IPDPS Workshops, 2017)

RTHMS: a tool for data placement on hybrid memory system. - Ivy Bo Peng; Roberto Gioiosa; Gokcen Kestor; Pietro Cicotti; Erwin Laure; Stefano Markidis (ISMM, 2017)

Exploring the Performance Benefit of Hybrid Memory System on HPC Environments. - Ivy Bo Peng; Roberto Gioiosa; Gokcen Kestor; Erwin Laure; Stefano Markidis (CoRR, 2017)

MPI Streams for HPC Applications. - Ivy Bo Peng; Stefano Markidis; Roberto Gioiosa; Gokcen Kestor; Erwin Laure (CoRR, 2017)

Efficient alarm behavior analytics for telecom networks. - Jiantao Wang; Caifeng He; Yijun Liu; Guangjian Tian; Ivy Peng; Jia Xing; Xiangbing Ruan; Haoran Xie 001; Fu Lee Wang (Inf. Sci., 2017)

Data Movement on Emerging Large-Scale Parallel Systems. - Ivy Bo Peng (2017)

Understanding scale-Dependent soft-Error Behavior of Scientific Applications. - Gokcen Kestor; Ivy Bo Peng; Roberto Gioiosa; Sriram Krishnamoorthy (CCGrid, 2018)

The SAGE project: a storage centric approach for exascale computing: invited paper. - Sai Narasimhamurthy; Nikita Danilov; Sining Wu; Ganesan Umanesan; Steven Wei Der Chien; Sergio Rivas-Gomez; Ivy Bo Peng; Erwin Laure; Shaun De Witt; Dirk Pleiter; Stefano Markidis (CF, 2018)

Tuyere: enabling scalable memory workloads for system exploration. - Ivy Bo Peng; Jeffrey S. Vetter; Shirley V. Moore; Seyong Lee (HPDC, 2018)

NVIDIA Tensor Core Programmability, Performance & Precision. - Stefano Markidis; Steven Wei Der Chien; Erwin Laure; Ivy Bo Peng; Jeffrey S. Vetter (IPDPS Workshops, 2018)

Siena: exploring the design space of heterogeneous memory systems. - Ivy Bo Peng; Jeffrey S. Vetter (SC, 2018)

The SAGE Project: a Storage Centric Approach for Exascale Computing. - Sai Narasimhamurthy; Nikita Danilov; Sining Wu; Ganesan Umanesan; Steven Wei Der Chien; Sergio Rivas-Gomez; Ivy Bo Peng; Erwin Laure; Shaun De Witt; Dirk Pleiter; Stefano Markidis (CoRR, 2018)

Characterizing the performance benefit of hybrid memory system for HPC applications. - Ivy Bo Peng; Roberto Gioiosa; Gokcen Kestor; Jeffrey S. Vetter; Pietro Cicotti; Erwin Laure; Stefano Markidis (Parallel Comput., 2018)

MPI windows on storage for HPC applications. - Sergio Rivas-Gomez; Roberto Gioiosa; Ivy Bo Peng; Gokcen Kestor; Sai Narasimhamurthy; Erwin Laure; Stefano Markidis (Parallel Comput., 2018)

Analyzing the suitability of contemporary 3D-stacked PIM architectures for HPC scientific applications. - Ivy Bo Peng; Jeffrey S. Vetter; Shirley Moore; Joydeep Rakshit; Stefano Markidis (CF, 2019)

System evaluation of the Intel optane byte-addressable NVM. - Ivy Bo Peng; Maya B. Gokhale; Eric W. Green (MEMSYS, 2019)

Posit NPB: Assessing the Precision Improvement in HPC Scientific Applications. - Steven Wei Der Chien; Ivy Bo Peng; Stefano Markidis (PPAM (1), 2019)

Performance Evaluation of Advanced Features in CUDA Unified Memory. - Steven Wei Der Chien; Ivy Bo Peng; Stefano Markidis (MCHPC@SC, 2019)

UMap: Enabling Application-driven Optimizations for Page Management. - Ivy Bo Peng; Marty McFadden; Eric W. Green; Keita Iwabuchi; Kai Wu 006; Dong Li 001; Roger Pearce; Maya B. Gokhale (MCHPC@SC, 2019)

SAGE: Percipient Storage for Exascale Data Centric Computing. - Sai Narasimhamurthy; Nikita Danilov; Sining Wu; Ganesan Umanesan; Stefano Markidis; Sergio Rivas-Gomez; Ivy Bo Peng; Erwin Laure; Dirk Pleiter; Shaun De Witt (Parallel Comput., 2019)

Ribbon: High Performance Cache Line Flushing for Persistent Memory. - Kai Wu 006; Ivy Bo Peng; Jie Ren 015; Dong Li 001 (PACT, 2020)

ATMem: adaptive data placement in graph applications on heterogeneous memories. - Yu Chen 036; Ivy Bo Peng; Zhen Peng; Xu Liu 001; Bin Ren (CGO, 2020)

tf-Darshan: Understanding Fine-grained I/O Performance in Machine Learning Workloads. - Steven Wei Der Chien; Artur Podobas; Ivy Bo Peng; Stefano Markidis (CLUSTER, 2020)

Demystifying the Performance of HPC Scientific Applications on NVM-based Memory Systems. - Ivy Bo Peng; Kai Wu 006; Jie Ren 015; Dong Li 001; Maya B. Gokhale (IPDPS, 2020)

sputniPIC: An Implicit Particle-in-Cell Code for Multi-GPU Systems. - Steven Wei Der Chien; Jonas Nylund; Gabriel Bengtsson; Ivy Bo Peng; Artur Podobas; Stefano Markidis (SBAC-PAD, 2020)

On the Memory Underutilization: Exploring Disaggregated Memory on HPC Systems. - Ivy Bo Peng; Roger Pearce; Maya B. Gokhale (SBAC-PAD, 2020)

Automatic Particle Trajectory Classification in Plasma Simulations. - Stefano Markidis; Ivy Bo Peng; Artur Podobas; Itthinat Jongsuebchoke; Gabriel Bengtsson; Pawel Andrzej Herman (MLHPC/AI4S@SC, 2020)

ArchTM: Architecture-Aware, High Performance Transaction for Persistent Memory. - Kai Wu 006; Jie Ren 015; Ivy Bo Peng; Dong Li 001 (FAST, 2021)

StreamBrain: An HPC Framework for Brain-like Neural Networks on CPUs, GPUs and FPGAs. - Artur Podobas; Martin Svedin; Steven Wei Der Chien; Ivy Bo Peng; Naresh Balaji Ravichandran; Pawel Andrzej Herman; Anders Lansner; Stefano Markidis (HEART, 2021)

Optimizing large-scale plasma simulations on persistent memory-based heterogeneous memory with effective data placement across memory hierarchy. - Jie Ren 015; Jiaolin Luo; Ivy Bo Peng; Kai Wu 006; Dong Li 001 (ICS, 2021)

MD-HM: memoization-based molecular dynamics simulations on big memory system. - Zhen Xie; Wenqian Dong; Jie Liu; Ivy Bo Peng; Yanbao Ma; Dong Li 001 (ICS, 2021)

A Holistic View of Memory Utilization on HPC Systems: Current and Future Trends. - Ivy Peng; Ian Karlin; Maya B. Gokhale; Kathleen Shoga; Matthew P. LeGendre; Todd Gamblin (MEMSYS, 2021)

Evaluating Emerging CXL-enabled Memory Pooling for HPC Systems. - Jacob Wahlgren; Maya B. Gokhale; Ivy Bo Peng (MCHPC@SC, 2022)

FPGA-accelerated simulation of variable latency memory systems. - Hüsrev Cilasun; Chris Macaraeg; Ivy Bo Peng; Abhik Sarkar; Maya B. Gokhale (MEMSYS, 2022)

Enabling Scalable and Extensible Memory-Mapped Datastores in Userspace. - Ivy Bo Peng; Maya B. Gokhale; Karim Youssef; Keita Iwabuchi; Roger Pearce (IEEE Trans. Parallel Distributed Syst., 2022)

Autonomy Loops for Monitoring, Operational Data Analytics, Feedback, and Response in HPC Operations. - Francieli Boito; Jim M. Brandt; Valeria Cardellini; Philip H. Carns; Florina M. Ciorba; Hilary Egan; Ahmed Eleliemy; Ann C. Gentile; Thomas Gruber; Jeff Hanson; Utz-Uwe Haus; Kevin A. Huck; et al. (CLUSTER Workshops, 2023)

Quantum Computer Simulations at Warp Speed: Assessing the Impact of GPU Acceleration: A Case Study with IBM Qiskit Aer, Nvidia Thrust & cuQuantum. - Jennifer Faj; Ivy Peng; Jacob Wahlgren; Stefano Markidis (e-Science, 2023)

OpenCUBE: Building an Open Source Cloud Blueprint with EPI Systems. - Ivy Peng; Martin Schulz 001; Utz-Uwe Haus; Craig Prunty; Pedro Marcuello; Emanuele Danovaro; Gabin Schieffer; Jacob Wahlgren; Daniel Medeiros 002; Philipp Friese; Stefano Markidis (Euro-Par Workshops, 2023)

Accelerating Drug Discovery in AutoDock-GPU with Tensor Cores. - Gabin Schieffer; Ivy Bo Peng (Euro-Par, 2023)

Boosting the Performance of Object Tracking with a Half-Precision Particle Filter on GPU. - Gabin Schieffer; Nattawat Pornthisan; Daniel Medeiros 002; Stefano Markidis; Jacob Wahlgren; Ivy Peng (Euro-Par Workshops (1), 2023)

Leveraging HPC Profiling and Tracing Tools to Understand the Performance of Particle-in-Cell Monte Carlo Simulations. - Jeremy J. Williams; David Tskhakaya; Stefan Costea; Ivy Bo Peng; Marta Garcia-Gasulla; Stefano Markidis (Euro-Par Workshops (1), 2023)

LibCOS: Enabling Converged HPC and Cloud Data Stores with MPI. - Daniel Araújo de Medeiros; Stefano Markidis; Ivy Bo Peng (HPC Asia, 2023)

Kub: Enabling Elastic HPC Workloads on Containerized Environments. - Daniel Medeiros 002; Jacob Wahlgren; Gabin Schieffer; Ivy Peng (SBAC-PAD, 2023)

Accelerator integration in a tile-based SoC: lessons learned with a hardware floating point compression engine. - Xueyang Liu; Patricia Gonzalez-Guerrero; Ivy Peng; Ronald G. Minnich; Maya B. Gokhale (SC Workshops, 2023)

A Quantitative Approach for Adopting Disaggregated Memory in HPC Systems. - Jacob Wahlgren; Gabin Schieffer; Maya B. Gokhale; Ivy Peng (SC, 2023)

A GPU-Accelerated Molecular Docking Workflow with Kubernetes and Apache Airflow. - Daniel Medeiros 002; Gabin Schieffer; Jacob Wahlgren; Ivy Bo Peng (ISC Workshops, 2023)

HM-Keeper: Scalable Page Management for Multi-Tiered Large Memory Systems. - Jie Ren 015; Dong Xu; Ivy Peng; Junhee Ryu; Kwangsik Shin; Daewoo Kim; Dong Li 001 (CoRR, 2023)

Perspectives on AI Architectures and Co-design for Earth System Predictability. - Maruti K. Mudunuru; James A. Ang; Mahantesh Halappanavar; Simon D. Hammond; Maya B. Gokhale; James C. Hoe; Tushar Krishna; Sarat Sreepathi; Matthew R. Norman; Ivy Bo Peng; Philip W. Jones (CoRR, 2023)

Leveraging HPC Profiling & Tracing Tools to Understand the Performance of Particle-in-Cell Monte Carlo Simulations. - Jeremy J. Williams; David Tskhakaya; Stefan Costea; Ivy Bo Peng; Marta Garcia-Gasulla; Stefano Markidis (CoRR, 2023)

Quantum Computer Simulations at Warp Speed: Assessing the Impact of GPU Acceleration. - Jennifer Faj; Ivy Bo Peng; Jacob Wahlgren; Stefano Markidis (CoRR, 2023)

Beyond the Buzz: Strategic Paths for Enabling Useful NISQ Applications. - Pratibha Raghupati Hegde; Oleksandr Kyriienko; Hermanni Heimonen; Panagiotis Tolias; Gilbert Netzer; Panagiotis Kl. Barkoutsos; Ricardo Vinuesa; Ivy Peng; Stefano Markidis (CF, 2024)

Harnessing Integrated CPU-GPU System Memory for HPC: a first look into Grace Hopper. - Gabin Schieffer; Jacob Wahlgren; Jie Ren 015; Jennifer Faj; Ivy Peng (ICPP, 2024)

Integration of Modern HPC Performance Tools in Vlasiator for Exascale Analysis and Optimization. - Camille Coti; Yann Pfau-Kempf; Markus Battarbee; Urs Ganse; Sameer Shende; Kevin A. Huck; Jordi Rodriquez; Leo Kotipalo; Jennifer Faj; Jeremy J. Williams; Ivy Peng; Allen D. Malony; et al. (IPDPS (Workshops), 2024)

On the Rise of AMD Matrix Cores: Performance, Power Efficiency, and Programmability. - Gabin Schieffer; Daniel Araújo de Medeiros; Jennifer Faj; Aniruddha Marathe; Ivy Peng (ISPASS, 2024)

Disaggregated Memory with SmartNIC Offloading: a Case Study on Graph Processing. - Jacob Wahlgren; Gabin Schieffer; Maya B. Gokhale; Roger Pearce; Ivy Peng (SBAC-PAD, 2024)

Multi-level Memory-Centric Profiling on ARM Processors with ARM SPE. - Samuel Miksits; Ruimin Shi; Maya B. Gokhale; Jacob Wahlgren; Gabin Schieffer; Ivy Peng (SC Workshops, 2024)

Understanding Data Movement in AMD Multi-GPU Systems with Infinity Fabric. - Gabin Schieffer; Ruimin Shi; Stefano Markidis; Andreas Herten; Jennifer Faj; Ivy Peng (SC Workshops, 2024)

Understanding Layered Portability from HPC to Cloud in Containerized Environments. - Daniel Araújo de Medeiros; Gabin Schieffer; Jacob Wahlgren; Ivy Peng (ISC Workshops, 2024)

Characterizing the Performance of the Implicit Massively Parallel Particle-in-Cell iPIC3D Code. - Jeremy J. Williams; Daniel Medeiros 002; Ivy Bo Peng; Stefano Markidis (CoRR, 2024)

ARC-V: Vertical Resource Adaptivity for HPC Workloads in Containerized Environments. - Daniel Medeiros 002; Jeremy J. Williams; Jacob Wahlgren; Leonardo Saud Maia Leite; Ivy Peng (Euro-Par (1), 2025)

ARM SVE Unleashed: Performance and Insights Across HPC Applications on Nvidia Grace. - Ruimin Shi; Gabin Schieffer; Maya B. Gokhale; Pei-Hung Lin; Hiren D. Patel; Ivy Peng (Euro-Par (2), 2025)

Physics-Aware Compression of Plasma Distribution Functions with GPU-Accelerated Gaussian Mixture Models. - Andong Hu; Luca Pennati; Ivy Peng; Stefano Markidis (ICCS (3), 2025)

Discovering Governing Equations of Geomagnetic Storm Dynamics with Symbolic Regression. - Stefano Markidis; Jonah Ekelund; Luca Pennati; Andong Hu; Ivy Peng (ICCS (1), 2025)

Apple vs. Oranges: Evaluating the Apple Silicon M-Series SoCs for HPC Performance and Efficiency. - Paul Hübner; Andong Hu; Ivy Peng; Stefano Markidis (IPDPS (Workshops), 2025)

Boosting Performance of Iterative Applications on GPUs: Kernel Batching with CUDA Graphs. - Jonah Ekelund; Stefano Markidis; Ivy Peng (PDP, 2025)

Harnessing CUDA-Q's MPS for Tensor Network Simulations of Large-Scale Quantum Circuits. - Gabin Schieffer; Stefano Markidis; Ivy Peng (PDP, 2025)

UMap: An application-oriented user level memory mapping library. - Ivy Peng; Jacob Wahlgren; Karim Youssef; Keita Iwabuchi; Roger Pearce; Maya B. Gokhale (Int. J. High Perform. Comput. Appl., 2025)

A Hybrid Quantum-Classical Particle-in-Cell Method for Plasma Simulations. - Pratibha Raghupati Hegde; Paolo Marcandelli; Yuanchun He; Luca Pennati; Jeremy J. Williams; Ivy Peng; Stefano Markidis (CoRR, 2025)

Exascale Implicit Kinetic Plasma Simulations on El Capitan for Solving the Micro-Macro Coupling in Magnetospheric Physics. - Stefano Markidis; Andong Hu; Ivy Peng; Luca Pennati; Ian Lumsden; Dewi Yokelson; Stephanie Brink; Olga Pearce; Thomas R. W. Scogland; Bronis R. de Supinski; Gian Luca Delzanno; Michela Taufer (CoRR, 2025)

Inter-APU Communication on AMD MI300A Systems via Infinity Fabric: a Deep Dive. - Gabin Schieffer; Jacob Wahlgren; Ruimin Shi; Edgar A. León; Roger Pearce; Maya B. Gokhale; Ivy Peng (CoRR, 2025)

Dissecting CPU-GPU Unified Physical Memory on AMD MI300A APUs. - Jacob Wahlgren; Gabin Schieffer; Ruimin Shi; Edgar A. León; Roger Pearce; Maya B. Gokhale; Ivy Peng (CoRR, 2025)

Tightly-integrated quantum-classical computing using the QHDL hardware description language. - Gilbert Netzer; Pratibha Raghupati Hegde; Ivy Peng; Stefano Markidis (Future Gener. Comput. Syst., 2026)