Gene regulatory networks in lactation: identification of global principles using bioinformatics. - Danielle G. Lemay; Margaret C. Neville; Michael Rudolph 004; Katherine S. Pollard; J. Bruce German (BMC Syst. Biol., 2007)

Workflows and Framework for Nutritional/Metabolic Phenotype/Genotype and Foods-for-Health Knowledge Integration. - Matthew Lange; J. Bruce German; Jim Kaput (ICBO, 2011)

G-NEST: a gene neighborhood scoring tool to identify co-conserved, co-expressed genes. - Danielle G. Lemay; William F. Martin; Angie S. Hinrichs; Monique Rijnkels; J. Bruce German; Ian Korf; Katherine S. Pollard (BMC Bioinform., 2012)

Automated glycopeptide analysis - review of current state and future directions. - David C. Dallas; William F. Martin; Serenus Hua; J. Bruce German (Briefings Bioinform., 2013)