Co-inertia analysis of amino-acid physico-chemical properties and protein composition with the ADE package. - Jean Thioulouse; J. R. Lobry (Comput. Appl. Biosci., 1995)

Correspondence discriminant analysis: a multivariate method for comparing classes of protein and nucleic acid sequences. - Guy Perrière; J. R. Lobry; Jean Thioulouse (Comput. Appl. Biosci., 1996)

Oriloc: prediction of replication boundaries in unannotated bacterial chromosomes. - A. C. Frank; J. R. Lobry (Bioinform., 2000)

Online synonymous codon usage analyses with the ade4 and seqinR packages. - D. Charif; Jean Thioulouse; J. R. Lobry; Guy Perrière (Bioinform., 2005)