A Knowledge Level Characterisation of Multi-Agent Systems. - J. Stuart Aitken; Franz Schmalhofer; Nigel Shadbolt (ECAI Workshop on Agent Theories, Architectures, and Languages, 1994)

Beyond the Knowledge Level: Descriptions of Rational Behavior for Sharing and Reuse. - Franz Schmalhofer; J. Stuart Aitken; Lyle E. Bourne Jr. (EKAW, 1994)

Resolution Theorem Proving in Reified Modal Logics. - J. Stuart Aitken; Han Reichgelt; Nigel Shadbolt (J. Autom. Reason., 1994)

Problem Solving in Interactive Proof: A Knowledge-Modelling Approach. - J. Stuart Aitken (ECAI, 1996)

Interactive Theorem Proving: An Empirical Study of User Activity. - J. Stuart Aitken; Philip D. Gray; Thomas F. Melham; Muffy Thomas (J. Symb. Comput., 1998)

An analysis of errors in interactive proof attempts. - J. Stuart Aitken; Thomas F. Melham (Interact. Comput., 2000)

Multiple algorithms for fraud detection. - Richard Wheeler; J. Stuart Aitken (Knowl. Based Syst., 2000)

A Process Ontology. - J. Stuart Aitken; Jon Curtis (EKAW, 2002)

A semantically guided and domain-independent evolutionary model for knowledge discovery from texts. - John A. Atkinson-Abutridy; Chris Mellish; J. Stuart Aitken (IEEE Trans. Evol. Comput., 2003)

Intelligent Agents for Coalition Search and Rescue Task Support. - Austin Tate; Jeff Dalton 002; Clauirton de Siebra; J. Stuart Aitken; Jeffrey M. Bradshaw; Andrzej Uszok (AAAI, 2004)

Part-of Relations in Anatomy Ontologies: A Proposal for RDFS and OWL Formalisations. - J. Stuart Aitken; Bonnie L. Webber; Jonathan Bard (Pacific Symposium on Biocomputing, 2004)

Combining Information Extraction with Genetic Algorithms for Text Mining. - John A. Atkinson-Abutridy; Chris Mellish; J. Stuart Aitken (IEEE Intell. Syst., 2004)

KAoS Policy Management for Semantic Web Services. - Andrzej Uszok; Jeffrey M. Bradshaw; Matt Johnson 001; Renia Jeffers; Austin Tate; Jeff Dalton 002; J. Stuart Aitken (IEEE Intell. Syst., 2004)

A Semantic Service Environment: A Case Study in Bioinformatics. - Stephen Potter; J. Stuart Aitken (ESWC, 2005)

Formalizing concepts of species, sex and developmental stage in anatomical ontologies. - J. Stuart Aitken (Bioinform., 2005)

COBrA: a bio-ontology editor. - J. Stuart Aitken; Roman Korf; Bonnie L. Webber; Jonathan Bard (Bioinform., 2005)

Inferring gene regulatory networks from classified microarray data: Initial results. - J. Stuart Aitken; Thanyaluk Jirapech-Umpai; Rónán Daly (BMC Bioinform., 2005)

Feature selection and classification for microarray data analysis: Evolutionary methods for identifying predictive genes. - Thanyaluk Jirapech-Umpai; J. Stuart Aitken (BMC Bioinform., 2005)

Automated Terminological and Structural Analysis of Human-Mouse Anatomical Ontology Mappings. - Sarah Luger; J. Stuart Aitken; Bonnie L. Webber (BMC Bioinform., 2005)

An ontological account of action in processes and plans. - J. Stuart Aitken (Knowl. Based Syst., 2005)

Speeding up the learning of equivalence classes of bayesian network structures. - Rónán Daly; Qiang Shen; J. Stuart Aitken (Artificial Intelligence and Soft Computing, 2006)

OBO Explorer: an editor for open biomedical ontologies in OWL. - J. Stuart Aitken; Yin Chen; Jonathan Bard (Bioinform., 2008)

COBrA and COBrA-CT: Ontology Engineering Tools. - J. Stuart Aitken; Yin Chen (Anatomy Ontologies for Bioinformatics, 2008)

Using Higher-Order Dynamic Bayesian Networks to Model Periodic Data from the Circadian Clock of Arabidopsis Thaliana. - Rónán Daly; Kieron D. Edwards; John S. O'Neill; J. Stuart Aitken; Andrew J. Millar; Mark A. Girolami (PRIB, 2009)

Learning Bayesian networks: approaches and issues. - Rónán Daly; Qiang Shen 001; J. Stuart Aitken (Knowl. Eng. Rev., 2011)