Superposition of molecules: Electron density fitting by application of fourier transforms. - J. Willem M. Nissink; Marcel L. Verdonk; Jan Kroon; Thomas Mietzner; Gerhard Klebe (J. Comput. Chem., 1997)

Simple knowledge-based descriptors to predict protein-ligand interactions. Methodology and validation. - J. Willem M. Nissink; Marcel L. Verdonk; Gerhard Klebe (J. Comput. Aided Mol. Des., 2000)

Simple Size-Independent Measure of Ligand Efficiency. - J. Willem M. Nissink (J. Chem. Inf. Model., 2009)

Beyond the Scope of Free-Wilson Analysis. 2 Can Distance Encoded R-Group Fingerprints Provide Interpretable Nonlinear Models? - Mats Eriksson; Hongming Chen; Lars Carlsson; J. Willem M. Nissink; John G. Cumming; Ingemar Nilsson (J. Chem. Inf. Model., 2014)

Does a Machine-Learned Potential Perform Better Than an Optimally Tuned Traditional Force Field? A Case Study on Fluorohydrins. - João Morado; Paul N. Mortenson; J. Willem M. Nissink; Jonathan W. Essex; Chris-Kriton Skylaris (J. Chem. Inf. Model., 2023)