Small Searchable κ-Spectra via Subset Rank Queries on the Spectral Burrows-Wheeler Transform. - Jarno N. Alanko; Simon J. Puglisi; Jaakko Vuohtoniemi (ACDA, 2023)

Subset Wavelet Trees. - Jarno N. Alanko; Elena Biagi 002; Simon J. Puglisi; Jaakko Vuohtoniemi (SEA, 2023)

Themisto: a scalable colored k-mer index for sensitive pseudoalignment against hundreds of thousands of bacterial genomes. - Jarno N. Alanko; Jaakko Vuohtoniemi; Tommi Mäklin; Simon J. Puglisi (Bioinform., 2023)