Why do G-quadruplexes dimerize through the 5'-ends? Driving forces for G4 DNA dimerization examined in atomic detail. - Mateusz Kogut; Cyprian Kleist; Jacek Czub (PLoS Comput. Biol., 2019)

Molywood: streamlining the design and rendering of molecular movies. - Milosz Wieczór; Adam Hospital; Genís Bayarri; Jacek Czub; Modesto Orozco (Bioinform., 2020)

Two-step mechanism of J-domain action in driving Hsp70 function. - Bartlomiej Tomiczek; Wojciech Delewski; Lukasz Nierzwicki; Milena Stolarska; Igor Grochowina; Brenda Schilke; Rafal Dutkiewicz; Marta A. Uzarska; Szymon J. Ciesielski; Jacek Czub; Elizabeth A. Craig; Jaroslaw Marszalek (PLoS Comput. Biol., 2020)

Molecular mechanism of proton-coupled ligand translocation by the bacterial efflux pump EmrE. - Jakub Jurasz; Maciej Baginski; Jacek Czub; Milosz Wieczór (PLoS Comput. Biol., 2021)

Gromologist: A GROMACS-oriented utility library for structure and topology manipulation. - Milosz Wieczór; Jacek Czub; Modesto Orozco (SoftwareX, 2025)