Group-walk: a rigorous approach to group-wise false discovery rate analysis by target-decoy competition. - Jack Freestone; Temana Short; William Stafford Noble; Uri Keich (Bioinform., 2022)

Semi-supervised Learning While Controlling the FDR with an Application to Tandem Mass Spectrometry Analysis. - Jack Freestone; Lukas Käll; William Stafford Noble; Uri Keich (RECOMB, 2024)