Displaying brain atlases using a portable Java application: the antomist. - Haihong Zhuang; Jacopo Annese; Daniel J. Valentino; Arthur W. Toga (Image-Guided Procedures, 2003)

A myelo-architectonic method for the structural classification of cortical areas. - Jacopo Annese; Alain Pitiot; Ivo D. Dinov; Arthur W. Toga (NeuroImage, 2004)

Postmortem high-resolution 3-dimensional imaging of the primate brain: Blockface imaging of perfusion stained tissue. - Jacopo Annese; D. M. Sforza; Mark F. Dubach; Douglas M. Bowden; Arthur W. Toga (NeuroImage, 2006)

A Scalable Visualization Environment for the Correlation of Radiological and Histopathological Data at Multiple Levels of Resolution. - Jacopo Annese; Philip Weber (MMVR, 2009)

Automated Determination of Axonal Orientation in the Deep White Matter of the Human Brain. - Hauke Bartsch; Paul Maechler; Jacopo Annese (Brain Connect., 2012)

The importance of combining MRI and large-scale digital histology in neuroimaging studies of brain connectivity and disease. - Jacopo Annese (Frontiers Neuroinformatics, 2012)