Automat and BLAST: comparison of two protein sequence similarity search programs. - Hubert Cantalloube; Gilles Labesse; Jacques Chomilier; Carole E. Nahum; Y. Y. Cho; V. Chams; A. Achour; A. Lachgar; J. P. Mbika; W. Issing (Comput. Appl. Biosci., 1995)

SUBIM: a program for analysing the Kabat database and determining the variability subgroup of a new immunoglobulin sequence. - S. Deret; C. Maissiat; P. Aucouturier; Jacques Chomilier (Comput. Appl. Biosci., 1995)

RPBS: a web resource for structural bioinformatics. - C. Alland; François Moreews; D. Boens; Mathilde Carpentier; S. Chiusa; Mathieu Lonquety; N. Renault; Y. Wong; Hubert Cantalloube; Jacques Chomilier; Joëlle Hochez; Joël Pothier; et al. (Nucleic Acids Res., 2005)

Frog: a FRee Online druG 3D conformation generator. - T. Bohme Leite; D. Gomes; Maria A. Miteva; Jacques Chomilier; Bruno O. Villoutreix; Pierre Tufféry (Nucleic Acids Res., 2007)

Evaluation of the Stability of Folding Nucleus upon Mutation. - Mathieu Lonquety; Zoé Lacroix; Jacques Chomilier (PRIB, 2008)

SPROUTS: a database for the evaluation of protein stability upon point mutation. - Mathieu Lonquety; Zoé Lacroix; Nikolaos Papandreou; Jacques Chomilier (Nucleic Acids Res., 2009)

Prediction of Chimeric Protein Fold. - Ruben Acuña; Zoé Lacroix; Fayez Hadji; Jacques Chomilier; Nikolaos Papandreou (BIOINFORMATICS, 2012)

Refurbishing Legacy Biological Workflows SPROUTS Case Study. - Ruben Acuña; Zoé Lacroix; Jacques Chomilier (SERVICES, 2012)

A Workflow for the Prediction of the Effects of Residue Substitution on Protein Stability. - Ruben Acuña; Zoé Lacroix; Jacques Chomilier (PRIB, 2013)

Structural role of exons in hemoglobin. - Monika Piwowar; Mateusz Banach; Leszek Konieczny; Jacques Chomilier; Irena Roterman (Bio Algorithms Med Syst., 2013)

Protein intrachain contact prediction with most interacting residues (MIR). - Ruben Acuña; Zoé Lacroix; Nikolaos Papandreou; Jacques Chomilier (Bio Algorithms Med Syst., 2014)

Some insights into the transition state ensemble of the folding of globular proteins. - Jacques Chomilier (Bio Algorithms Med Syst., 2014)

Managing and Documenting Legacy Scientific Workflows. - Ruben Acuña; Jacques Chomilier; Zoé Lacroix (J. Integr. Bioinform., 2015)

Correlating topology and thermodynamics to predict protein structure sensitivity to point mutations. - Paula Milan Rodriguez; Dirk Stratmann; Elodie Duprat; Nikolaos Papandreou; Ruben Acuña; Zoé Lacroix; Jacques Chomilier (Bio Algorithms Med Syst., 2018)

Exhaustive Exploration of the Conformational Landscape of Small Cyclic Peptides Using a Robotics Approach. - Maud Jusot; Dirk Stratmann; Marc Vaisset; Jacques Chomilier; Juan Cortés (J. Chem. Inf. Model., 2018)

Protein multiple alignments: sequence-based versus structure-based programs. - Mathilde Carpentier; Jacques Chomilier (Bioinform., 2019)