Diffusion-weighted magnetic resonance imaging fibre tracking using a front evolution algorithm. - Jacques-Donald Tournier; Fernando Calamante; David G. Gadian; Alan Connelly (NeuroImage, 2003)

Direct estimation of the fiber orientation density function from diffusion-weighted MRI data using spherical deconvolution. - Jacques-Donald Tournier; Fernando Calamante; David G. Gadian; Alan Connelly (NeuroImage, 2004)

Cortical abnormalities and language function in young patients with basal ganglia stroke. - Alison Rowan; Faraneh Vargha-Khadem; Fernando Calamante; Jacques-Donald Tournier; Fenella J. Kirkham; Wui K. Chong; Torsten Baldeweg; Alan Connelly; David G. Gadian (NeuroImage, 2007)

Robust determination of the fibre orientation distribution in diffusion MRI: Non-negativity constrained super-resolved spherical deconvolution. - Jacques-Donald Tournier; Fernando Calamante; Alan Connelly (NeuroImage, 2007)

Estimation of uncertainty in constrained spherical deconvolution fiber orientations. - Ben Jeurissen; Alexander Leemans; Jacques-Donald Tournier; Jan Sijbers (ISBI, 2008)

Evaluation of the accuracy and angular resolution of q-ball imaging. - Kuan-Hung Cho; Chun-Hung Yeh; Jacques-Donald Tournier; Yi-Ping Chao; Jyh-Horng Chen; Ching-Po Lin (NeuroImage, 2008)

Resolving crossing fibres using constrained spherical deconvolution: Validation using diffusion-weighted imaging phantom data. - Jacques-Donald Tournier; Chun-Hung Yeh; Fernando Calamante; Kuan-Hung Cho; Alan Connelly; Ching-Po Lin (NeuroImage, 2008)

A software tool to generate simulated white matter structures for the assessment of fibre-tracking algorithms. - Thomas G. Close; Jacques-Donald Tournier; Fernando Calamante; Leigh A. Johnston; Iven M. Y. Mareels; Alan Connelly (NeuroImage, 2009)

Track-density imaging (TDI): Super-resolution white matter imaging using whole-brain track-density mapping. - Fernando Calamante; Jacques-Donald Tournier; Graeme D. Jackson; Alan Connelly (NeuroImage, 2010)

The effect of finite diffusion gradient pulse duration on fibre orientation estimation in diffusion MRI. - Chun-Hung Yeh; Jacques-Donald Tournier; Kuan-Hung Cho; Ching-Po Lin; Fernando Calamante; Alan Connelly (NeuroImage, 2010)

Track density imaging (TDI): Validation of super resolution property. - Fernando Calamante; Jacques-Donald Tournier; Robin M. Heidemann; Alfred Anwander; Graeme D. Jackson; Alan Connelly (NeuroImage, 2011)

Symmetric diffeomorphic registration of fibre orientation distributions. - David Raffelt; Jacques-Donald Tournier; Jurgen Fripp; Stuart Crozier; Alan Connelly; Olivier Salvado (NeuroImage, 2011)

A k-space sharing 3D GRASE pseudocontinuous ASL method for whole-brain resting-state functional connectivity. - Xiaoyun Liang 001; Jacques-Donald Tournier; Richard A. J. Masterton; Alan Connelly; Fernando Calamante (Int. J. Imaging Syst. Technol., 2012)

MRtrix: Diffusion tractography in crossing fiber regions. - Jacques-Donald Tournier; Fernando Calamante; Alan Connelly (Int. J. Imaging Syst. Technol., 2012)

Super-resolution track-density imaging studies of mouse brain: Comparison to histology. - Fernando Calamante; Jacques-Donald Tournier; Nyoman D. Kurniawan; Zhengyi Yang 004; Erika Gyengesi; Graham J. Galloway; David C. Reutens; Alan Connelly (NeuroImage, 2012)

A generalised framework for super-resolution track-weighted imaging. - Fernando Calamante; Jacques-Donald Tournier; Robert E. Smith 002; Alan Connelly (NeuroImage, 2012)

Apparent Fibre Density: A novel measure for the analysis of diffusion-weighted magnetic resonance images. - David Raffelt; Jacques-Donald Tournier; Stephen E. Rose; Gerard R. Ridgway; Robert D. Henderson; Stuart Crozier; Olivier Salvado; Alan Connelly (NeuroImage, 2012)

Anatomically-constrained tractography: Improved diffusion MRI streamlines tractography through effective use of anatomical information. - Robert E. Smith 002; Jacques-Donald Tournier; Fernando Calamante; Alan Connelly (NeuroImage, 2012)

Track-weighted functional connectivity (TW-FC): A tool for characterizing the structural-functional connections in the brain. - Fernando Calamante; Richard A. J. Masterton; Jacques-Donald Tournier; Robert E. Smith 002; Lisa Willats; David Raffelt; Alan Connelly (NeuroImage, 2013)

SIFT: Spherical-deconvolution informed filtering of tractograms. - Robert E. Smith 002; Jacques-Donald Tournier; Fernando Calamante; Alan Connelly (NeuroImage, 2013)

Identification and interpretation of microstructural abnormalities in motor pathways in adolescents born preterm. - Samuel Groeschel; Jacques-Donald Tournier; Gemma B. Northam; Torsten Baldeweg; John Wyatt; Brigitte Vollmer; Alan Connelly (NeuroImage, 2014)

Multi-tissue constrained spherical deconvolution for improved analysis of multi-shell diffusion MRI data. - Ben Jeurissen; Jacques-Donald Tournier; Thijs Dhollander; Alan Connelly; Jan Sijbers (NeuroImage, 2014)

Mapping somatosensory connectivity in adult mice using diffusion MRI tractography and super-resolution track density imaging. - Kay Richards; Fernando Calamante; Jacques-Donald Tournier; Nyoman D. Kurniawan; Farnoosh Sadeghian; Alexander R. Retchford; Gabriel Davis Jones; Christopher A. Reid; David C. Reutens; Roger J. Ordidge; Alan Connelly; Steven Petrou (NeuroImage, 2014)

Quantification of track-weighted imaging (TWI): Characterisation of within-subject reproducibility and between-subject variability. - Lisa Willats; David Raffelt; Robert E. Smith 002; Jacques-Donald Tournier; Alan Connelly; Fernando Calamante (NeuroImage, 2014)

Quantification of voxel-wise total fibre density: Investigating the problems associated with track-count mapping. - Fernando Calamante; Robert E. Smith 002; Jacques-Donald Tournier; David Raffelt; Alan Connelly (NeuroImage, 2015)

Fourier Tract Sampling (FouTS): A framework for improved inference of white matter tracts from diffusion MRI by explicitly modelling tract volume. - Thomas G. Close; Jacques-Donald Tournier; Leigh A. Johnston; Fernando Calamante; Iven Mareels; Alan Connelly (NeuroImage, 2015)

Connectivity-based fixel enhancement: Whole-brain statistical analysis of diffusion MRI measures in the presence of crossing fibres. - David A. Raffelt; Robert E. Smith 002; Gerard R. Ridgway; Jacques-Donald Tournier; David N. Vaughan; Stephen E. Rose; Robert D. Henderson; Alan Connelly (NeuroImage, 2015)

The effects of SIFT on the reproducibility and biological accuracy of the structural connectome. - Robert E. Smith 002; Jacques-Donald Tournier; Fernando Calamante; Alan Connelly (NeuroImage, 2015)

SIFT2: Enabling dense quantitative assessment of brain white matter connectivity using streamlines tractography. - Robert E. Smith 002; Jacques-Donald Tournier; Fernando Calamante; Alan Connelly (NeuroImage, 2015)

Early development of structural networks and the impact of prematurity on brain connectivity. - Dafnis Batalle; Emer J. Hughes; Hui Zhang 005; Jacques-Donald Tournier; Nora Tusor; Paul Aljabar; Luqman Wali; Daniel C. Alexander; Joseph V. Hajnal; Chiara Nosarti; A. David Edwards; Serena J. Counsell (NeuroImage, 2017)

Investigating white matter fibre density and morphology using fixel-based analysis. - David A. Raffelt; Jacques-Donald Tournier; Robert E. Smith 002; David N. Vaughan; Graeme D. Jackson; Gerard R. Ridgway; Alan Connelly (NeuroImage, 2017)

Developing a Framework for Studying Brain Networks in Neonatal Hypoxic-Ischemic Encephalopathy. - Finn Lennartsson; Angela Darekar; Koushik Maharatna; Daniel Konn; David Allen; Jacques-Donald Tournier; John Broulidakis; Brigitte Vollmer (MIUA, 2018)

Slice-level diffusion encoding for motion and distortion correction. - Jana Hutter; Daan Christiaens; Torben Schneider; Lucilio Cordero-Grande; Paddy Slator; Maria Deprez; Anthony N. Price; Jacques-Donald Tournier; Mary A. Rutherford; Joseph V. Hajnal (Medical Image Anal., 2018)

Automated processing pipeline for neonatal diffusion MRI in the developing Human Connectome Project. - Matteo Bastiani; Jesper L. R. Andersson; Lucilio Cordero-Grande; Maria Murgasova; Jana Hutter; Anthony N. Price; Antonios Makropoulos; Sean P. Fitzgibbon; Emer J. Hughes; Daniel Rueckert; Suresh Victor; Mary A. Rutherford; et al. (NeuroImage, 2019)

A framework for multi-component analysis of diffusion MRI data over the neonatal period. - Maximilian Pietsch; Daan Christiaens; Jana Hutter; Lucilio Cordero-Grande; Anthony N. Price; Emer J. Hughes; A. David Edwards; Joseph V. Hajnal; Serena J. Counsell; Jacques-Donald Tournier (NeuroImage, 2019)

MRtrix3: A fast, flexible and open software framework for medical image processing and visualisation. - Jacques-Donald Tournier; Robert E. Smith 002; David Raffelt; Rami Tabbara; Thijs Dhollander; Maximilian Pietsch; Daan Christiaens; Ben Jeurissen; Chun-Hung Yeh; Alan Connelly (NeuroImage, 2019)

Inherent and unpredictable bias in multi-component DESPOT myelin water fraction estimation. - Daniel J. West; Rui Pedro A. G. Teixeira; Tobias C. Wood; Joseph V. Hajnal; Jacques-Donald Tournier; Shaihan J. Malik (NeuroImage, 2019)

Learning Compact ${q}$ -Space Representations for Multi-Shell Diffusion-Weighted MRI. - Daan Christiaens; Lucilio Cordero-Grande; Jana Hutter; Anthony N. Price; Maria Deprez; Joseph V. Hajnal; Jacques-Donald Tournier (IEEE Trans. Medical Imaging, 2019)

Multi-channel Registration for Diffusion MRI: Longitudinal Analysis for the Neonatal Brain. - Alena Uus; Maximilian Pietsch; Irina Grigorescu; Daan Christiaens; Jacques-Donald Tournier; Lucilio Cordero-Grande; Jana Hutter; A. David Edwards; Joseph V. Hajnal; Maria Deprez (WBIR, 2020)

On the need for bundle-specific microstructure kernels in diffusion MRI. - Daan Christiaens; Jelle Veraart; Lucilio Cordero-Grande; Anthony N. Price; Jana Hutter; Joseph V. Hajnal; Jacques-Donald Tournier (NeuroImage, 2020)

Higher Order Spherical Harmonics Reconstruction of Fetal Diffusion MRI With Intensity Correction. - Maria Deprez; Anthony Price; Daan Christiaens; Georgia Lockwood Estrin; Lucilio Cordero-Grande; Jana Hutter; Alessandro Daducci; Jacques-Donald Tournier; Mary A. Rutherford; Serena J. Counsell; Meritxell Bach Cuadra; Joseph V. Hajnal (IEEE Trans. Medical Imaging, 2020)

dStripe: Slice artefact correction in diffusion MRI via constrained neural network. - Maximilian Pietsch; Daan Christiaens; Joseph V. Hajnal; Jacques-Donald Tournier (Medical Image Anal., 2021)

Scattered slice SHARD reconstruction for motion correction in multi-shell diffusion MRI. - Daan Christiaens; Lucilio Cordero-Grande; Maximilian Pietsch; Jana Hutter; Anthony N. Price; Emer J. Hughes; Katy Vecchiato; Maria Deprez; A. David Edwards; Joseph V. Hajnal; Jacques-Donald Tournier (NeuroImage, 2021)

Preterm birth alters the development of cortical microstructure and morphology at term-equivalent age. - Ralica Dimitrova; Maximilian Pietsch; Judit Ciarrusta; Sean P. Fitzgibbon; Logan Z. J. Williams; Daan Christiaens; Lucilio Cordero-Grande; Dafnis Batalle; Antonios Makropoulos; Andreas Schuh; Anthony N. Price; Jana Hutter; et al. (NeuroImage, 2021)

Predicting age and clinical risk from the neonatal connectome. - Yassine Taoudi-Benchekroun; Daan Christiaens; Irina Grigorescu; Oliver Gale-Grant; Andreas Schuh; Maximilian Pietsch; Andrew Chew; Nicholas Harper; Shona Falconer; Tanya Poppe; Emer J. Hughes; Jana Hutter; et al. (NeuroImage, 2022)

A Deep Learning Approach for Segmenting the Subplate and Proliferative Zones in Fetal Brain MRI. - Helena S. Sousa; Abi Gartner; Alena Uus; Vanessa Kyriakopoulou; Brigita Ziukaite; Isa Anzak; Jonathan O'Muircheartaigh; Joseph V. Hajnal; Jacques-Donald Tournier; Alexander Hammers; Mary A. Rutherford; Maria Deprez (PIPPI@MICCAI, 2023)