Consistency and Preference Criteria for Generalization Languages Handling Negation and Disjunction. - Jacques Nicolas (ECAI, 1988)

Static Learning for an Adaptive Theorem Prover. - Catherine Belleannée; Jacques Nicolas (EWSL, 1991)

Seed Space and Version Space: Generalizing from Approximations. - Jacques Nicolas (EWSL, 1991)

Empirical Bias for Version Space. - Jacques Nicolas (IJCAI, 1991)

Inference of Finite Automata: Reducing the Search Space with an Ordering of Pairs of States. - François Coste; Jacques Nicolas (ECML, 1998)

How Considering Incompatible State Mergings May Reduce the DFA Induction Search Tree. - François Coste; Jacques Nicolas (ICGI, 1998)

Twelve Numerical, Symbolic and Hybrid Supervised Classification Methods. - Olivier Gascuel; Bernadette Bouchon-Meunier; Gilles Caraux; Patrick Gallinari; Alain Guénoche; Yann Guermeur; Yves Lechevallier; Christophe Marsala; Laurent Miclet; Jacques Nicolas; Richard Nock; Mohammed Ramdani 003; et al. (Int. J. Pattern Recognit. Artif. Intell., 1998)

Cooperative Metaheuristics for Exploring Proteomic Data. - Robin Gras; David Hernández; Patricia Hernandez; Nadine Zangger; Yoann Mescam; Julien Frey; Olivier Martin 002; Jacques Nicolas; Ron D. Appel (Artif. Intell. Rev., 2003)

Threshold extraction in metabolite concentration data. - André Flöter; Jacques Nicolas; Torsten Schaub; Joachim Selbig (Bioinform., 2004)

Cooperative Metaheuristics for Exploring Proteomic Data. - Robin Gras; David Hernández; Patricia Hernandez; Nadine Zangger; Yoan Mescam; Julien Frey; Olivier Martin 002; Jacques Nicolas; Ron D. Appel (Artificial Intelligence Methods And Tools For Systems Biology, 2004)

Suffix-tree analyser (STAN): looking for nucleotidic and peptidic patterns in chromosomes. - Jacques Nicolas; Patrick Durand; Grégory Ranchy; Sébastien Tempel; Anne-Sophie Valin (Bioinform., 2005)

Comparison EUROMET.EM-K8 of DC voltage ratio: results. - Giancarlo Marullo-Reedtz; Roberto Cerri; Wolfgang Waldmann; Jiri Streit; Pekka Immonen; Isabelle Blanc; Felix Raso; Torsten Funck; Bernd Schumacher; Erik F. Dierikx; Mário Nunes; Peter Vrabcek; et al. (IEEE Trans. Instrum. Meas., 2005)

Domain organization within repeated DNA sequences: application to the study of a family of transposable elements. - Sébastien Tempel; Mathieu Giraud; Dominique Lavenier; Israël-César Lerman; Anne-Sophie Valin; Ivan Couée; Abdelhak El Amrani; Jacques Nicolas (Bioinform., 2006)

Browsing repeats in genomes: Pygram and an application to non-coding region analysis. - Patrick Durand; Frédéric Mahé; Anne-Sophie Valin; Jacques Nicolas (BMC Bioinform., 2006)

Syntaxe, raisonnement et génomes. - Jacques Nicolas (2008)

c-GAMMA: Comparative Genome Analysis of Molecular Markers. - Pierre Peterlongo; Jacques Nicolas; Dominique Lavenier; Raoul Vorc'h; Joël Querellou (PRIB, 2009)

CRISPI: a CRISPR interactive database. - Christine Rousseau; Mathieu Gonnet; Marc Le Romancer; Jacques Nicolas (Bioinform., 2009)

SHREC'10 Track: Protein Model Classification. - Lazaros Mavridis; Vishwesh Venkatraman; David W. Ritchie; Naoto Morikawa; Rumen Andonov; Alexandre Cornu; Noël Malod-Dognin; Jacques Nicolas; Maja Temerinac-Ott; Marco Reisert; Hans Burkhardt; Apostolos Axenopoulos; et al. (3DOR@Eurographics, 2010)

ModuleOrganizer: detecting modules in families of transposable elements. - Sébastien Tempel; Christine Rousseau; Fariza Tahi; Jacques Nicolas (BMC Bioinform., 2010)

Introduction to the Special Theme: Computational Biology. - Gunnar W. Klau; Jacques Nicolas (ERCIM News, 2010)

Locally Substitutable Languages for Enhanced Inductive Leaps. - François Coste; Gaëlle Garet; Jacques Nicolas (ICGI, 2012)

Edge Selection in a Noisy Graph by Concept Analysis: Application to a Genomic Network. - Valentin Wucher; Denis Tagu; Jacques Nicolas (ECDA, 2013)

Automated Enzyme Classification by Formal Concept Analysis. - François Coste; Gaëlle Garet; Agnès Groisillier; Jacques Nicolas; Thierry Tonon (ICFCA, 2014)

A bottom-up efficient algorithm learning substitutable languages from positive examples. - François Coste; Gaëlle Garet; Jacques Nicolas (ICGI, 2014)

Logol: Expressive Pattern Matching in Sequences. Application to Ribosomal Frameshift Modeling. - Catherine Belleannée; Olivier Sallou; Jacques Nicolas (PRIB, 2014)

From Formal Concepts to Analogical Complexes. - Laurent Miclet; Jacques Nicolas (CLA, 2015)

Learning Boolean logic models of signaling networks with ASP. - Santiago Videla; Carito Guziolowski; Federica Eduati; Sven Thiele; Martin Gebser; Jacques Nicolas; Julio Saez-Rodriguez; Torsten Schaub; Anne Siegel (Theor. Comput. Sci., 2015)

Packing Graphs with ASP for Landscape Simulation. - Thomas Guyet; Yves Moinard; Jacques Nicolas; René Quiniou (IJCAI, 2016)

FCA in a Logical Programming Setting for Visualization-Oriented Graph Compression. - Lucas Bourneuf; Jacques Nicolas (ICFCA, 2017)

Learning local substitutable context-free languages from positive examples in polynomial time and data by reduction. - François Coste; Jacques Nicolas (ICGI, 2018)

Concept Lattices as a Search Space for Graph Compression. - Lucas Bourneuf; Jacques Nicolas (ICFCA, 2019)

Artificial Intelligence and Bioinformatics. - Jacques Nicolas (A Guided Tour of Artificial Intelligence Research (3) (III), 2020)