Topological and Epsilon-Entropy for Large Volume Limits of Discretized Parabolic Equations. - Gabriel J. Lord; Jacques Rougemont (SIAM J. Numer. Anal., 2002)

DNA microarray data and contextual analysis of correlation graphs. - Jacques Rougemont; Pascal Hingamp (BMC Bioinform., 2003)

Nemo: an evolutionary and population genetics programming framework. - Frédéric Guillaume; Jacques Rougemont (Bioinform., 2006)

Few crucial links assure checkpoint efficiency in the yeast cell-cycle network. - Gautier Stoll; Jacques Rougemont; Felix Naef (Bioinform., 2006)

Probabilistic base calling of Solexa sequencing data. - Jacques Rougemont; Arnaud Amzallag; Christian Iseli; Laurent Farinelli; Ioannis Xenarios; Felix Naef (BMC Bioinform., 2008)

MIMAS 3.0 is a Multiomics Information Management and Annotation System. - Alexandre Gattiker; Leandro Hermida; Robin Liechti; Ioannis Xenarios; Olivier Collin; Jacques Rougemont; Michael Primig (BMC Bioinform., 2009)

The Microbe browser for comparative genomics. - Alexandre Gattiker; Christophe Dessimoz; Adrian Schneider; Ioannis Xenarios; Marco Pagni; Jacques Rougemont (Nucleic Acids Res., 2009)

Stabilizing patterning in the Drosophila segment polarity network by selecting models in silico. - Gautier Stoll; Mirko Bischofberger; Jacques Rougemont; Felix Naef (Biosyst., 2010)

GETPrime: a gene- or transcript-specific primer database for quantitative real-time PCR. - Carine Gubelmann; Alexandre Gattiker; Andreas Massouras; Korneel Hens; Fabrice P. A. David; Frederik Decouttere; Jacques Rougemont; Bart Deplancke (Database J. Biol. Databases Curation, 2011)

Protecting and evaluating genomic privacy in medical tests and personalized medicine. - Erman Ayday; Jean Louis Raisaro; Jean-Pierre Hubaux; Jacques Rougemont (WPES, 2013)

Fifteen years SIB Swiss Institute of Bioinformatics: life science databases, tools and support. - Heinz Stockinger; Adrian M. Altenhoff; Konstantin Arnold; Amos Bairoch; Frederic B. Bastian; Sven Bergmann; Lydie Bougueleret; Philipp Bucher; Mauro Delorenzi; Lydie Lane; Philippe Le Mercier; Frédérique Lisacek; et al. (Nucleic Acids Res., 2014)

GETPrime 2.0: gene- and transcript-specific qPCR primers for 13 species including polymorphisms. - Fabrice P. A. David; Jacques Rougemont; Bart Deplancke (Nucleic Acids Res., 2017)

Two-Tier Mapper, an unbiased topology-based clustering method for enhanced global gene expression analysis. - Rachel Jeitziner; Mathieu Carrière; Jacques Rougemont; Steve Oudot; Kathryn Hess; Cathrin Brisken (Bioinform., 2019)