Ancestral population genomics using coalescence hidden Markov models and heuristic optimisation algorithms. - Jade Yu Cheng; Thomas Mailund (Comput. Biol. Chem., 2015)

A genomic history of Aboriginal Australia. - Anna-Sapfo Malaspinas; Michael C. Westaway; Craig Muller; Vitor C. Sousa; Oscar Lao; Isabel Alves; Anders Bergström; Georgios Athanasiadis; Jade Yu Cheng; Jacob E. Crawford; Tim H. Heupink; Enrico Macholdt; et al. (Nat., 2016)

Fast admixture analysis and population tree estimation for SNP and NGS data. - Jade Yu Cheng; Thomas Mailund; Rasmus Nielsen (Bioinform., 2017)