Benchmarks in antimicrobial peptide prediction are biased due to the selection of negative data. - Katarzyna Sidorczuk; Przemyslaw Gagat; Filip Pietluch; Jakub Kala; Dominik Rafacz; Laura Bakala; Jadwiga Slowik; Rafal Kolenda; Stefan Rödiger; Legana C. H. W. Fingerhut; Ira Cooke; Pawel Mackiewicz; et al. (Briefings Bioinform., 2022)

imputomics: web server and R package for missing values imputation in metabolomics data. - Jaroslaw Chilimoniuk; Krystyna Grzesiak; Jakub Kala; Dominik Nowakowski; Adam Kretowski; Rafal Kolenda; Michal Ciborowski; Michal Burdukiewicz (Bioinform., 2024)