Induction of comprehensible models for gene expression datasets by subgroup discovery methodology. - Dragan Gamberger; Nada Lavrac; Filip Zelezný; Jakub Tolar (J. Biomed. Informatics, 2004)

Relational Subgroup Discovery for Descriptive Analysis of Microarray Data. - Igor Trajkovski; Filip Zelezný; Jakub Tolar; Nada Lavrac (CompLife, 2006)

Relational Descriptive Analysis of Gene Expression Data. - Igor Trajkovski; Filip Zelezný; Nada Lavrac; Jakub Tolar (STAIRS, 2006)

SEGS: Search for enriched gene sets in microarray data. - Igor Trajkovski; Nada Lavrac; Jakub Tolar (J. Biomed. Informatics, 2008)

Learning Relational Descriptions of Differentially Expressed Gene Groups. - Igor Trajkovski; Filip Zelezný; Nada Lavrac; Jakub Tolar (IEEE Trans. Syst. Man Cybern. Part C, 2008)

Integrating Multiple-Platform Expression Data through Gene Set Features. - Matej Holec; Filip Zelezný; Jirí Kléma; Jakub Tolar (ISBRA, 2009)

Comparative Evaluation of Set-Level Techniques in Microarray Classification. - Jirí Kléma; Matej Holec; Filip Zelezný; Jakub Tolar (ISBRA, 2011)

Prediction of DNA-Binding Propensity of Proteins by the Ball-Histogram Method. - Andrea Szabóová; Ondrej Kuzelka; Sergio Morales E.; Filip Zelezný; Jakub Tolar (ISBRA, 2011)

Comparative evaluation of set-level techniques in predictive classification of gene expression samples. - Matej Holec; Jirí Kléma; Filip Zelezný; Jakub Tolar (BMC Bioinform., 2012)

Prediction of DNA-binding propensity of proteins by the ball-histogram method using automatic template search. - Andrea Szabóová; Ondrej Kuzelka; Filip Zelezný; Jakub Tolar (BMC Bioinform., 2012)

A multitask clustering approach for single-cell RNA-seq analysis in Recessive Dystrophic Epidermolysis Bullosa. - Huanan Zhang; Catherine A. A. Lee; Zhuliu Li; John R. Garbe; Cindy R. Eide; Raphael Petegrosso; Rui Kuang; Jakub Tolar (PLoS Comput. Biol., 2018)