From gigabyte to kilobyte: a bioinformatics protocol for mining large RNA-Seq transcriptomics data. - Jilong Li; Jie Hou 001; Lin Sun; Jordan Maximillian Wilkins; Yuan Lu; Chad E. Niederhuth; Benjamin Ryan Merideth; Thomas P. Mawhinney; Valeri V. Mossine; Michael Greenlief; John C. Walker; William R. Folk; et al. (BCB, 2015)

DeepGRN: prediction of transcription factor binding site across cell-types using attention-based deep neural networks. - Chen Chen; Jie Hou 001; Xiaowen Shi; Hua Yang; James A. Birchler; Jianlin Cheng (BMC Bioinform., 2021)