The design of chromophore containing biomolecules. - Ruth Pachter; Zhiqiang Wang; James A. Lupo; Steven B. Fairchild; Brian Sennett (Global Minimization of Nonconvex Energy Functions: Molecular Conformation and Protein Folding, 1995)

Benchmarking UHGROMOS. - James A. Lupo (HICSS (5), 1995)

Large Scale Molecular Dynamics Simulations with Fast Multipole Implementations. - Zhiqiang Wang; James A. Lupo; Alan McKenney; Ruth Pachter (SC, 1999)