Analysis of variance components in gene expression data. - James J. Chen; Robert R. Delongchamp; Chen-An Tsai; Huey-miin Hsueh; Frank Sistare; Karol L. Thompson; Varsha G. Desai; James C. Fuscoe (Bioinform., 2004)

Cross-platform comparability of microarray technology: Intra-platform consistency and appropriate data analysis procedures are essential. - Leming M. Shi; Weida Tong; Hong Fang; Uwe Scherf; Jing Han 003; Raj K. Puri; Felix W. Frueh; Federico M. Goodsaid; Lei Guo 006; Zhenqiang Su; Tao Han 007; James C. Fuscoe; et al. (BMC Bioinform., 2005)

Microarray scanner calibration curves: characteristics and implications. - Leming M. Shi; Weida Tong; Zhenqiang Su; Tao Han 007; Jing Han 003; Raj K. Puri; Hong Fang; Felix W. Frueh; Federico M. Goodsaid; Lei Guo 006; William S. Branham; James J. Chen; et al. (BMC Bioinform., 2005)

Gene Expression Profiles Distinguish the Carcinogenic Effects of Aristolochic Acid in Target (Kidney) and Non-target (Liver) Tissues in Rats. - Tao Chen; Lei Guo 006; Lu Zhang 013; Leming M. Shi; Hong Fang; Yongming Sun; James C. Fuscoe; Nan Mei (BMC Bioinform., 2006)

Improvement in the Reproducibility and Accuracy of DNA Microarray Quantification by Optimizing Hybridization Conditions. - Tao Han 007; Cathy D. Melvin; Leming M. Shi; William S. Branham; Carrie L. Moland; P. Scott Pine; Karol L. Thompson; James C. Fuscoe (BMC Bioinform., 2006)

Microarray analysis distinguishes differential gene expression patterns from large and small colony Thymidine kinase mutants of L5178Y mouse lymphoma cells. - Tao Han 007; Jianyong Wang 001; Weida Tong; Martha M. Moore; James C. Fuscoe; Tao Chen (BMC Bioinform., 2006)

Analysis of gene expression changes in relation to toxicity and tumorigenesis in the livers of Big Blue transgenic rats fed comfrey (Symphytum officinale). - Nan Mei; Lei Guo 006; Lu Zhang 013; Leming M. Shi; Yongming Andrew Sun; Chris Fung; Carrie L. Moland; Stacey L. Dial; James C. Fuscoe; Tao Chen (BMC Bioinform., 2006)

Comparison of gene expression profiles altered by comfrey and riddelliine in rat liver. - Lei Guo 006; Nan Mei; Stacey L. Dial; James C. Fuscoe; Tao Chen (BMC Bioinform., 2007)

Gene expression changes induced by the tumorigenic pyrrolizidine alkaloid riddelliine in liver of Big Blue rats. - Nan Mei; Lei Guo 006; Ruqing Liu; James C. Fuscoe; Tao Chen (BMC Bioinform., 2007)

Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270 HapMap samples. - Huixiao Hong; Zhenqiang Su; Weigong Ge; Leming M. Shi; Roger Perkins; Hong Fang; Joshua Xu; James J. Chen; Tao Han 007; Jim Kaput; James C. Fuscoe; Weida Tong (BMC Bioinform., 2008)

Proceedings of the 2008 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. - Jonathan D. Wren; Dawn Wilkins; James C. Fuscoe; Susan Bridges; Stephen Winters-Hilt; Yuriy Gusev (BMC Bioinform., 2008)

The Accurate Prediction of Protein Family from Amino Acid Sequence by Measuring Features of Sequence Fragments. - Huixiao Hong; Qilong Hong; Roger Perkins; Leming M. Shi; Hong Fang; Zhenqiang Su; Yvonne P. Dragan; James C. Fuscoe; Weida Tong (J. Comput. Biol., 2009)