A hybrid genetic algorithm for the identification of metabolic models. - John Yen; David Randolph; Bogju Lee; James C. Liao (ICTAI, 1995)

Using a Hybrid Genetic Algorithm and Fuzzy Logic for Metabolic Modeling. - John Yen; Bogju Lee; James C. Liao (AAAI/IAAI, Vol. 1, 1996)

A hybrid approach to modeling metabolic systems using a genetic algorithm and simplex method. - John Yen; James C. Liao; Bogju Lee; David Randolph (IEEE Trans. Syst. Man Cybern. Part B, 1998)

Computational modeling of nitric oxide transport and consumption in blood vessels. - Nael H. El-Farra; Panagiotis D. Christofides; James C. Liao (CDC, 2002)

Co-expression pattern from DNA microarray experiments as a tool for operon prediction. - Chiara Sabatti; Lars Rohlin; Min-Kyu Oh; James C. Liao (Nucleic Acids Res., 2002)

Vocabulon: a dictionary model approach for reconstruction and localization of transcription factor binding sites. - Chiara Sabatti; Lars Rohlin; Kenneth Lange; James C. Liao (Bioinform., 2005)

A Generalized Framework for Network Component Analysis. - Riccardo Boscolo; Chiara Sabatti; James C. Liao; Vwani P. Roychowdhury (IEEE ACM Trans. Comput. Biol. Bioinform., 2005)

Design of Synthetic Gene-Metabolic Circuits. - James C. Liao (BioADIT, 2006)

A Gibbs sampler for the identification of gene expression and network connectivity consistency. - Mark P. Brynildsen; Linh M. Tran; James C. Liao (Bioinform., 2006)

Transcriptome network component analysis with limited microarray data. - Simon J. Galbraith; Linh M. Tran; James C. Liao (Bioinform., 2006)

Biological network mapping and source signal deduction. - Mark P. Brynildsen; Tung-Yun Wu; Shi-Shang Jang; James C. Liao (Bioinform., 2007)

An Information Theoretic Exploratory Method for Learning Patterns of Conditional Gene Coexpression from Microarray Data. - Riccardo Boscolo; James C. Liao; Vwani P. Roychowdhury (IEEE ACM Trans. Comput. Biol. Bioinform., 2008)

Using Network Component Analysis to Dissect Regulatory Networks Mediated by Transcription Factors in Yeast. - Chun Ye; Simon J. Galbraith; James C. Liao; Eleazar Eskin (PLoS Comput. Biol., 2009)

Trimming of mammalian transcriptional networks using network component analysis. - Linh M. Tran; Daniel R. Hyduke; James C. Liao (BMC Bioinform., 2010)

An efficient immersed boundary-lattice Boltzmann method for the hydrodynamic interaction of elastic filaments. - Fang-Bao Tian; Haoxiang Luo; Luoding Zhu; James C. Liao; Xi-Yun Lu (J. Comput. Phys., 2011)

Stability of Ensemble Models Predicts Productivity of Enzymatic Systems. - Matthew K. Theisen; Jimmy G. Lafontaine Rivera; James C. Liao (PLoS Comput. Biol., 2016)