Intrinsic limitations in mainstream methods of identifying network motifs in biology. - James Fodor; Michael Brand; Rebecca J. Stones; Ashley M. Buckle (BMC Bioinform., 2020)

Compositionality and Sentence Meaning: Comparing Semantic Parsing and Transformers on a Challenging Sentence Similarity Dataset. - James Fodor; Simon De Deyne; Shinsuke Suzuki (Comput. Linguistics, 2025)

Line Goes Up? Inherent Limitations of Benchmarks for Evaluating Large Language Models. - James Fodor (CoRR, 2025)