GenomeGraphs: integrated genomic data visualization with R. - Steffen Durinck; James H. Bullard; Paul T. Spellman; Sandrine Dudoit (BMC Bioinform., 2009)

Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments. - James H. Bullard; Elizabeth Purdom; Kasper D. Hansen; Sandrine Dudoit (BMC Bioinform., 2010)