Simple rules underlying gene expression profiles of more than six subtypes of acute lymphoblastic leukemia (ALL) patients. - Jinyan Li 001; Huiqing Liu; James R. Downing; Allen Eng-Juh Yeoh; Limsoon Wong (Bioinform., 2003)

PROMISE: a tool to identify genomic features with a specific biologically interesting pattern of associations with multiple endpoint variables. - Stan Pounds; Cheng Cheng; Xueyuan Cao; Kristine R. Crews; William Plunkett; Varsha Gandhi; Jeffrey Rubnitz; Raul C. Ribeiro; James R. Downing; Jatinder Lamba (Bioinform., 2009)

Reference alignment of SNP microarray signals for copy number analysis of tumors. - Stan Pounds; Cheng Cheng; Charles Mullighan; Susana C. Raimondi; Sheila Shurtleff; James R. Downing (Bioinform., 2009)

Subgroup and outlier detection analysis. - Gang Wu 016; Iwona Pawlikowska; Tanja Gruber; James R. Downing; Jinghui Zhang; Stan Pounds (BMC Bioinform., 2013)

CC-PROMISE effectively integrates two forms of molecular data with multiple biologically related endpoints. - Xueyuan Cao; Kristine R. Crews; James R. Downing; Jatinder Lamba; Stanley Pounds (BMC Bioinform., 2016)

Proceedings of the 15th Annual UT-KBRIN Bioinformatics Summit 2016: Cadiz, KY, USA. 8-10 April 2016. - Eric C. Rouchka; Julia H. Chariker; Benjamin J. Harrison; Juw Won Park; Xueyuan Cao; Stanley Pounds; Susana C. Raimondi; James R. Downing; Raul C. Ribeiro; Jeffrey Rubnitz; Jatinder Lamba; Bernie J. Daigle Jr.; et al. (BMC Bioinform., 2016)

POST: A framework for set-based association analysis in high-dimensional data. - Xueyuan Cao; E. Olusegun George; Mingjuan Wang; Dale B. Armstrong; Cheng Cheng; Susana C. Raimondi; Jeffrey E. Rubnitz; James R. Downing; Mondira Kundu; Stanley Pounds (BIBM, 2017)