Evolving stochastic context-free grammars for RNA secondary structure prediction. - James W. J. Anderson; Paula Tataru; Joe Staines; Jotun Hein; Rune B. Lyngsø (BMC Bioinform., 2012)

Frnakenstein: multiple target inverse RNA folding. - Rune B. Lyngsø; James W. J. Anderson; Elena Sizikova; Amarendra Badugu; Tomas Hyland; Jotun Hein (BMC Bioinform., 2012)

Oxfold: kinetic folding of RNA using stochastic context-free grammars and evolutionary information. - James W. J. Anderson; Pierre A. Haas; Leigh-Anne Mathieson; Vladimir Volynkin; Rune B. Lyngsø; Paula Tataru; Jotun Hein (Bioinform., 2013)

StatAlign 2.0: combining statistical alignment with RNA secondary structure prediction. - Preeti Arunapuram; Ingolfur Edvardsson; Michael Golden; James W. J. Anderson; Ádám Novák; Zsuzsanna Sükösd; Jotun Hein (Bioinform., 2013)

Quantifying variances in comparative RNA secondary structure prediction. - James W. J. Anderson; Ádám Novák; Zsuzsanna Sükösd; Michael Golden; Preeti Arunapuram; Ingolfur Edvardsson; Jotun Hein (BMC Bioinform., 2013)

Characterising RNA secondary structure space using information entropy. - Zsuzsanna Sükösd; Bjarne Knudsen; James W. J. Anderson; Ádám Novák; Jørgen Kjems; Christian N. S. Pedersen (BMC Bioinform., 2013)