Environment specific substitution tables improve membrane protein alignment. - Jamie R. Hill; Sebastian Kelm; Jiye Shi; Charlotte M. Deane (Bioinform., 2011)

MP-T: improving membrane protein alignment for structure prediction. - Jamie R. Hill; Charlotte M. Deane (Bioinform., 2013)

Memoir: template-based structure prediction for membrane proteins. - Jean-Paul Ebejer; Jamie R. Hill; Sebastian Kelm; Jiye Shi; Charlotte M. Deane (Nucleic Acids Res., 2013)